RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Cpne2P59108 548 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 G430049J08RikQ3TL09 166 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Tex30Q3TUU5 225 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Gfod1Q3UHD2 390 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Ewsr1Q61545 655 aaKnown RBP17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 CstbQ62426 98 aaKnown RBP17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Olfr107Q7TRK4 309 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Arf2Q8BSL7 181 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Txnl1Q8CDN6 289 aaKnown RBP17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 RhovQ8VDU1 236 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Olfr1324Q8VEU7 332 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Olfr957Q9EQB7 311 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Tesk1O70146 627 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Rpl12P35979 165 aaKnown RBP17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Dpagt1P42867 410 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Lpar6Q8BMC0 344 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Olfr1297Q8VGE8 312 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Lipt2Q9D009 231 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Myoz1Q9JK37 296 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 NmuQ9QXK8 174 aa17.59■□□□□ 0.41
Trim47-201ENSMUST00000021120 Olfr1532-ps1A0A0R4J8U2 307 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Zfp456B2RUK9 458 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Slc18b1D3Z5L6 459 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Vmn1r34G3XA52 309 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr707K7N662 307 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Vmn1r121K7N6J4 314 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 AF067061O70616 171 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 HbzP06467 142 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Hoxb5P09079 269 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 SgcbP82349 320 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Tmem18Q3TUD9 140 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Nkain2Q4PNJ2 208 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm12258Q5NC63 627 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gpank1Q61858 372 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Zfp663Q6NXM6 656 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Nadk2Q8C5H8 452 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Vmn1r183Q8K3N5 305 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Tmem107Q9CPV0 140 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Ccdc198Q9CPZ1 294 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Ndufa6Q9CQZ5 131 aaKnown RBP17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rpl14Q9CR57 217 aaKnown RBP17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 RelnQ60841 3461 aa17.58■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm14444A2ARW3 426 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rdh16f1E9Q9P8 317 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm9772F6XPD8 135 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm10662Q3UT86 313 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Actrt3Q8BXF8 369 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Alg12Q8VDB2 486 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Phf19Q9CXG9 578 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Ppp1r27Q9D119 154 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Ccdc54Q9DAL3 329 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Fbp1Q9QXD6 338 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Asxl3Q8C4A5 2259 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm4131A0A140LJ24 318 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 DffbO54788 344 aaKnown RBP17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 P10404 641 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Slc25a4P48962 298 aaKnown RBP17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 MENTQ569E4 350 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rnps1Q99M28 305 aaKnown RBP17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Lysmd2Q9D7V2 215 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Izumo1Q9D9J7 397 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 1700025F22RikQ9D9Y7 111 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Samd8Q9DA37 478 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Iqcf5Q9DAL7 148 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Znf593Q9DB42 134 aaKnown RBP17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 FcrlsQ9EQY5 509 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rbfox1Q9JJ43 396 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Cldn10Q9Z0S6 231 aa17.57■□□□□ 0.4
Trim47-201ENSMUST00000021120 Dchs1E9PVD3 3291 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm15737D3YZR0 106 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr248E9Q1L6 309 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Amy1P00687 511 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Upk2P38575 184 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Egr3P43300 387 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 SgcaP82350 387 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Zic4Q61467 341 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Negr1Q80Z24 348 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Paqr8Q80ZE5 354 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Scgb2b27Q8R1E9 112 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Q8WUR0 141 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 MpiQ924M7 423 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Snu13Q9D0T1 128 aaKnown RBP17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm13547A2ARC0 163 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr1179A2AUS6 307 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Tarm1B6A8R8 288 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr905L7N1X5 310 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Glp1rO35659 463 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Cbr2P08074 244 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Cited1P97769 203 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Vmn1r223Q5SSA0 361 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr5Q60889 312 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Nfam1Q8R4V1 264 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Olfr1260Q8VGN9 310 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Ddb2Q99J79 432 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rtn4rQ99PI8 473 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Rab5aQ9CQD1 215 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Mrpl18Q9CQL5 180 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Asb5Q9D1A4 329 aa17.56■□□□□ 0.4
Trim47-201ENSMUST00000021120 Gm2026A2ART4 498 aa17.55■□□□□ 0.4
Trim47-201ENSMUST00000021120 Scgb1b29D2XZ31 93 aa17.55■□□□□ 0.4
Retrieved 100 of 22,080 RNA–protein pairs in 69.9 ms