RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ESPL1Q14674 2120 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 MIDNQ504T8 468 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 CXorf66Q5JRM2 361 aaPredicted RBP8.64□□□□□ -1.03
VPS25-203ENST00000589520 FAM74A1Q5RGS3 127 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 SPAG16Q8N0X2 631 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 ZNRF1Q8ND25 227 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
VPS25-203ENST00000589520 TMED6Q8WW62 240 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 RAB39BQ96DA2 213 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 GNPNAT1Q96EK6 184 aaPredicted RBP8.64□□□□□ -1.03
VPS25-203ENST00000589520 PLPPR2Q96GM1 343 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 ADTRPQ96IZ2 230 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 CIB3Q96Q77 187 aaPredicted RBP8.64□□□□□ -1.03
VPS25-203ENST00000589520 HEATR1Q9H583 2144 aaKnown RBP8.64□□□□□ -1.03
VPS25-203ENST00000589520 KCNJ16Q9NPI9 418 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 MMP26Q9NRE1 261 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 PRELID3BQ9Y3B1 194 aa8.64□□□□□ -1.03
VPS25-203ENST00000589520 APC2O95996 2303 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 FAM24AA6NFZ4 105 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 ZNF705EA8MWA4 302 aaPredicted RBP8.63□□□□□ -1.03
VPS25-203ENST00000589520 KIAA1324LA8MWY0 1029 aaPredicted RBP8.63□□□□□ -1.03
VPS25-203ENST00000589520 UMAD1C9J7I0 102 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 E7EQL1 145 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 TRIM77I1YAP6 450 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SSSCA1O60232 199 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 CYB5R3P00387 301 aaPredicted RBP8.63□□□□□ -1.03
VPS25-203ENST00000589520 IGKV1-39P01597 117 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 IGKV1D-39P04432 117 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SPP1P10451 314 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 M6PRP20645 277 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SULT1A1P50225 295 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 F2RL1P55085 397 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 LOXL3P58215 753 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 C17orf58Q2M2W7 97 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SPRNQ5BIV9 151 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 TPRX1Q8N7U7 411 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 OR1S2Q8NGQ3 325 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 RFESDQ8TAC1 157 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 TCTEX1D2Q8WW35 142 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 GAL3ST2Q9H3Q3 398 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 DYNLRB1Q9NP97 96 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 TMEM106BQ9NUM4 274 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 GFOD1Q9NXC2 390 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 IDI2-AS1Q9NZ38 188 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 CACNG5Q9UF02 275 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 RNF150Q9ULK6 438 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 PSG11Q9UQ72 335 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 LINC00312Q9Y6C7 94 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SVILO95425 2214 aa8.63□□□□□ -1.03
VPS25-203ENST00000589520 SPTAN1Q13813 2472 aaKnown RBP8.63□□□□□ -1.03
VPS25-203ENST00000589520 TXNL1O43396 289 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 IGKV1-5P01602 117 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 DANCRP0C864 163 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 P0C879 139 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 DUTP33316 252 aaKnown RBP8.62□□□□□ -1.03
VPS25-203ENST00000589520 HBG1P69891 147 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 HBG2P69892 147 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 CCL8P80075 99 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 TAGLNQ01995 201 aaKnown RBP8.62□□□□□ -1.03
VPS25-203ENST00000589520 NHLH2Q02577 135 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 PJVKQ0ZLH3 352 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 ATP6V1FQ16864 119 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 ADAM5Q6NVV9 412 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 UBALD1Q8TB05 177 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 CCL13Q99616 98 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 AIFM2Q9BRQ8 373 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 SMIM3Q9BZL3 60 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 PARP12Q9H0J9 701 aaKnown RBP8.62□□□□□ -1.03
VPS25-203ENST00000589520 ACACAQ13085 2346 aa8.62□□□□□ -1.03
VPS25-203ENST00000589520 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 TNFRSF13BO14836 293 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 ST8SIA5O15466 376 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 NDUFB3O43676 98 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 ZG16O60844 167 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 IFNA5P01569 189 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 GYPAP02724 150 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 OR8U8P0C7N1 319 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 DAOP14920 347 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 EPHA1P21709 976 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 THBS3P49746 956 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 PAX9P55771 341 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 UBE2KP61086 200 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 RPP30P78346 268 aaKnown RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 SRSF1Q07955 248 aaKnown RBP eCLIP8.61□□□□□ -1.03
VPS25-203ENST00000589520 LRRC10Q5BKY1 277 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 DPPA3Q6W0C5 159 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 Q6ZRM9 215 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 DMRTC2Q8IXT2 367 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 ZNF808Q8N4W9 903 aaPredicted RBP8.61□□□□□ -1.03
VPS25-203ENST00000589520 C8orf31Q8N9H6 132 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 LFNGQ8NES3 379 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 OR52E5Q8NH55 327 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
VPS25-203ENST00000589520 CA5BP1Q8WTZ4 195 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms