RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TMEM56Q96MV1 263 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 DCTN5Q9BTE1 182 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 TMEM56-RWDD3S4R434 201 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 IGKV1D-13A0A0B4J2D9 117 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 B9A039 149 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 GYPAP02724 150 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 IGKV1-13P0DP09 117 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 RPL35P42766 123 aaKnown RBP16.87■□□□□ 0.29
SMG8-203ENST00000578922 ZNF266Q14584 549 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 SLC35E4Q6ICL7 350 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 TP53RKQ96S44 253 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 MBNL3Q9NUK0 354 aaKnown RBP16.87■□□□□ 0.29
SMG8-203ENST00000578922 COA4Q9NYJ1 87 aa16.87■□□□□ 0.29
SMG8-203ENST00000578922 DSCAMO60469 2012 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 PRH1P02810 166 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 CTXN2P0C2S0 81 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 EFNB3Q15768 340 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 CLEC9AQ6UXN8 241 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 C11orf1Q9H5F2 150 aa16.86■□□□□ 0.29
SMG8-203ENST00000578922 HRNRQ86YZ3 2850 aaPredicted RBP16.86■□□□□ 0.29
SMG8-203ENST00000578922 HSPA12AO43301 675 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 MT-ND4LP03901 98 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 NHLH2Q02577 135 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 ZNF808Q8N4W9 903 aaPredicted RBP16.85■□□□□ 0.29
SMG8-203ENST00000578922 OR2C3Q8N628 320 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 OR1L1Q8NH94 360 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 EIF5A2Q9GZV4 153 aaKnown RBP16.85■□□□□ 0.29
SMG8-203ENST00000578922 MS4A5Q9H3V2 200 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 KCNIP1Q9NZI2 227 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 LRRC30A6NM36 301 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 C19orf84I3L1E1 186 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 GNRHRP30968 328 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 KCNJ3P48549 501 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 EWSR1Q01844 656 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMG8-203ENST00000578922 FAM53AQ6NSI3 398 aaPredicted RBP16.85■□□□□ 0.29
SMG8-203ENST00000578922 OR13A1Q8NGR1 328 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 FAM222BQ8WU58 562 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 GPHA2Q96T91 129 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 CCL13Q99616 98 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 CABLES2Q9BTV7 478 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 RPS10P5Q9NQ39 176 aa16.85■□□□□ 0.29
SMG8-203ENST00000578922 UMAD1C9J7I0 102 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 C12orf77C9JDV5 145 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 EDDM3BP56851 147 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 SFT2D1Q8WV19 159 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 C14orf79Q96F83 325 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 SNX22Q96L94 193 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 TMEM204Q9BSN7 226 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 SLC25A31Q9H0C2 315 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 PARP12Q9H0J9 701 aaKnown RBP16.84■□□□□ 0.29
SMG8-203ENST00000578922 UBE2J1Q9Y385 318 aaPredicted RBP16.84■□□□□ 0.29
SMG8-203ENST00000578922 ARID1AO14497 2285 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 RAI1Q7Z5J4 1906 aaPredicted RBP16.84■□□□□ 0.29
SMG8-203ENST00000578922 CLEC18AA5D8T8 446 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 OOEPA6NGQ2 149 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 C1orf196B1AJZ1 125 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 HSD17B6O14756 317 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 TUSC2O75896 110 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 MMP9P14780 707 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 SSTR5P35346 364 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 NKX2-1P43699 371 aaPredicted RBP16.84■□□□□ 0.29
SMG8-203ENST00000578922 STUMQ69YW2 141 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 MEX3BQ6ZN04 569 aaKnown RBP16.84■□□□□ 0.29
SMG8-203ENST00000578922 ZNF695Q8IW36 515 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 ZNF565Q8N9K5 539 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 CLEC18CQ8NCF0 446 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 CLCC1Q96S66 551 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 C12orf57Q99622 126 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 SLC35B3Q9H1N7 401 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 PLEKHF2Q9H8W4 249 aa16.84■□□□□ 0.29
SMG8-203ENST00000578922 PIGBOS1A0A0B4J2F0 54 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 C7orf77A4D0Y5 90 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 K7N7A8 449 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 PITX3O75364 302 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 RHEBQ15382 184 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 AWAT1Q58HT5 328 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 ZNF818PQ6ZRF7 136 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 FAM216BQ8N7L0 139 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 RFESDQ8TAC1 157 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 HIST1H2BAQ96A08 127 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 CCL28Q9NRJ3 127 aa16.83■□□□□ 0.28
SMG8-203ENST00000578922 S100A12P80511 92 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 HABP2Q14520 560 aaPredicted RBP16.82■□□□□ 0.28
SMG8-203ENST00000578922 TBC1D26Q86UD7 250 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 H1FOOQ8IZA3 346 aaPredicted RBP16.82■□□□□ 0.28
SMG8-203ENST00000578922 ZNF561Q8N587 486 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 HSD17B11Q8NBQ5 300 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 MGST3O14880 152 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 HBZP02008 142 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 IL2RGP31785 369 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 CEACAM6P40199 344 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 LTC4SQ16873 150 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 SELENOHQ8IZQ5 122 aaKnown RBP16.82■□□□□ 0.28
SMG8-203ENST00000578922 PPP1R35Q8TAP8 253 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 GAFA1Q96PS6 74 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 SH3BGRL3Q9H299 93 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 TMEM106BQ9NUM4 274 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 OR2W1Q9Y3N9 320 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 FLNCQ14315 2725 aa16.82■□□□□ 0.28
SMG8-203ENST00000578922 BTBD17A6NE02 478 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms