RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 TCF23Q7RTU1 214 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 MMP24Q9Y5R2 645 aa15.85■□□□□ 0.13
SMPD3-203ENST00000563226 ATRXP46100 2492 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 SHISA9B4DS77 424 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 TXNL1O43396 289 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 SYNGR2O43760 224 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 CD55P08174 381 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 P0C879 139 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 TLE1Q04724 770 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 ZNF788Q6ZQV5 615 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 LEAP2Q969E1 77 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 KCNJ16Q9NPI9 418 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 PARP11Q9NR21 331 aa15.84■□□□□ 0.13
SMPD3-203ENST00000563226 FAM212BQ9NTI7 297 aaPredicted RBP15.84■□□□□ 0.13
SMPD3-203ENST00000563226 SLC31A2O15432 143 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 DANCRP0C864 163 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 IRF2P14316 349 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 CA7P43166 264 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 BAXQ07812 192 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 KLRB1Q12918 225 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 ATRAIDQ6UW56 229 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 IL34Q6ZMJ4 242 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 KDF1Q8NAX2 398 aaPredicted RBP15.83■□□□□ 0.13
SMPD3-203ENST00000563226 RAB40CQ96S21 281 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 OR6C3Q9NZP0 311 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 FAM96BQ9Y3D0 163 aa15.83■□□□□ 0.13
SMPD3-203ENST00000563226 MED19A0JLT2 244 aaPredicted RBP15.83■□□□□ 0.12
SMPD3-203ENST00000563226 E7EQL1 145 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 YPEL1O60688 119 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 ADCYAP1P18509 176 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 ATP6V0CP27449 155 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 GPR12P47775 334 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 BLOC1S1P78537 153 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 TEX36Q5VZQ5 186 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 NCR3LG1Q68D85 454 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 ZNF66Q6ZN08 573 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.83■□□□□ 0.12
SMPD3-203ENST00000563226 EDARADDQ8WWZ3 215 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 YPEL2Q96QA6 119 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 ZNF665Q9H7R5 613 aa15.83■□□□□ 0.12
SMPD3-203ENST00000563226 TMEM218A2RU14 115 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 FAM90A27PA6NNH2 459 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 AGPAT2O15120 278 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 RPL23AP62750 156 aaKnown RBP15.82■□□□□ 0.12
SMPD3-203ENST00000563226 ZNF266Q14584 549 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 SWI5Q1ZZU3 235 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 NCMAPQ5T1S8 102 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 TMEM182Q6ZP80 229 aaPredicted RBP15.82■□□□□ 0.12
SMPD3-203ENST00000563226 SSX8Q7RTT4 187 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 IFI27L2Q9H2X8 130 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 CACFD1Q9UGQ2 172 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 CLDN14O95500 239 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 TNFRSF1AP19438 455 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 GRNP28799 593 aaKnown RBP15.82■□□□□ 0.12
SMPD3-203ENST00000563226 MIDNQ504T8 468 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 RPL39P5Q59GN2 51 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 FAM209AQ5JX71 171 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 DIRC2Q96SL1 478 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 HSD17B10Q99714 261 aaKnown RBP15.82■□□□□ 0.12
SMPD3-203ENST00000563226 WSB1Q9Y6I7 421 aa15.82■□□□□ 0.12
SMPD3-203ENST00000563226 A0A1W2PPE3 182 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 NUDT19A8MXV4 375 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 TOR1AO14656 332 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 C1QTNF9P0C862 333 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 MUC1P15941 1255 aaPredicted RBP15.81■□□□□ 0.12
SMPD3-203ENST00000563226 DUTP33316 252 aaKnown RBP15.81■□□□□ 0.12
SMPD3-203ENST00000563226 C1orf229Q6ZS94 237 aaPredicted RBP15.81■□□□□ 0.12
SMPD3-203ENST00000563226 LYPD6BQ8NI32 183 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 NCOR1P1Q9H4R4 102 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 SAP30LQ9HAJ7 183 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 COA4Q9NYJ1 87 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 PSENENQ9NZ42 101 aa15.81■□□□□ 0.12
SMPD3-203ENST00000563226 HCFC1P51610 2035 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 KBTBD11-OT1A0A1B0GTJ5 212 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 SULT1A1P50225 295 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 F2RL1P55085 397 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 CASP6P55212 293 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 RUNX1Q01196 453 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 ARL16Q0P5N6 197 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 HAPLN4Q86UW8 402 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 STX12Q86Y82 276 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 LINC01560Q8TB33 94 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 NGBQ9NPG2 151 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 CLN8Q9UBY8 286 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 YLPM1P49750 1951 aaKnown RBP15.8■□□□□ 0.12
SMPD3-203ENST00000563226 ARFGEF3Q5TH69 2177 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 CCL21O00585 134 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 METTL15P1P0C7V9 234 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 ZNF616Q08AN1 781 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 CDSNQ15517 529 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 ST6GALNAC3Q8NDV1 305 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 SUN5Q8TC36 379 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 RNASE6Q93091 150 aaKnown RBP15.8■□□□□ 0.12
SMPD3-203ENST00000563226 ATP5SQ99766 215 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 FAM234AQ9H0X4 552 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 RBKSQ9H477 322 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 TREM1Q9NP99 234 aa15.8■□□□□ 0.12
SMPD3-203ENST00000563226 DOCK11Q5JSL3 2073 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 TRGV10A0A0A0MS01 117 aa15.79■□□□□ 0.12
SMPD3-203ENST00000563226 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms