RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 OR51B6Q9H340 312 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 DKKL1Q9UK85 242 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 GUCA1BQ9UMX6 200 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 SMARCA2P51531 1590 aa1.88□□□□□ -2.11
SCFD1-221ENST00000556534 MED1Q15648 1581 aaPredicted RBP1.88□□□□□ -2.11
SCFD1-221ENST00000556534 EVPLLA8MZ36 301 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 GGTLC3B5MD39 225 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 ACOX3O15254 700 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 EEF1E1O43324 174 aaKnown RBP1.87□□□□□ -2.11
SCFD1-221ENST00000556534 DENRO43583 198 aaKnown RBP1.87□□□□□ -2.11
SCFD1-221ENST00000556534 DEDDO75618 318 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 LYPLA2O95372 231 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 OPN1SWP03999 348 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 OR4A8P0C604 315 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 CRABP2P29373 138 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 CTBP2P56545 445 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 FGF12P61328 243 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 SLC35A2P78381 396 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 HLA-DRB3P79483 266 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 FABP5Q01469 135 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 BIKQ13323 160 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 JOSD1Q15040 202 aaPredicted RBP1.87□□□□□ -2.11
SCFD1-221ENST00000556534 PDK2Q15119 407 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 EBPQ15125 230 aaKnown RBP1.87□□□□□ -2.11
SCFD1-221ENST00000556534 ACSM3Q53FZ2 586 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 ACSBG2Q5FVE4 666 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 SYPL2Q5VXT5 272 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 SCXQ7RTU7 201 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 LYZL2Q7Z4W2 148 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 LYPD6Q86Y78 171 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 OR1M1Q8NGA1 313 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 Q8WTZ3 238 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 ABHD14BQ96IU4 210 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 PKMYT1Q99640 499 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 EIF5A2Q9GZV4 153 aaKnown RBP1.87□□□□□ -2.11
SCFD1-221ENST00000556534 TAS2R9Q9NYW1 312 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 TAS2R1Q9NYW7 299 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 C3orf18Q9UK00 162 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 DNAJC12Q9UKB3 198 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 POLR1DQ9Y2S0 133 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 MMACHCQ9Y4U1 282 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 NCAPD3P42695 1498 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 EVC2Q86UK5 1308 aa1.87□□□□□ -2.11
SCFD1-221ENST00000556534 KIF15Q9NS87 1388 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 TRPM6Q9BX84 2022 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 DICER1Q9UPY3 1922 aaKnown RBP1.86□□□□□ -2.11
SCFD1-221ENST00000556534 A0A1B0GU33 70 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 M0R381 172 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 SLC25A20O43772 301 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 CPSF4O95639 269 aaKnown RBP1.86□□□□□ -2.11
SCFD1-221ENST00000556534 IL3P08700 152 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 OR10J1P30954 320 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 OPRM1P35372 400 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 CDKN2CP42773 168 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 RSU1Q15404 277 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 CLVS2Q5SYC1 327 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 AMMECR1LQ6DCA0 310 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 OR10K2Q6IF99 312 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 SFXN4Q6P4A7 337 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 SMARCD3Q6STE5 483 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 RASSF6Q6ZTQ3 369 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 HIST1H2BAQ96A08 127 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 C1QTNF6Q9BXI9 259 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 OR51I1Q9H343 314 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 DUSP21Q9H596 190 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 WASHC3Q9Y3C0 194 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 PCYT1BQ9Y5K3 369 aaPredicted RBP1.86□□□□□ -2.11
SCFD1-221ENST00000556534 MRC2Q9UBG0 1479 aa1.86□□□□□ -2.11
SCFD1-221ENST00000556534 SPATA31E1Q6ZUB1 1445 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 KIF13AQ9H1H9 1805 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 TMED7-TICAM2A0A0A6YYA0 188 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 TRAV8-1A0A0A6YYK1 113 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 C5orf49A4QMS7 147 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 LINC00862A6NCI5 91 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 STK16O75716 305 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 HIST1H1EP10412 219 aaKnown RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 HOXA6P31267 233 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 PPP1CCP36873 323 aaKnown RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 TCL1AP56279 114 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 FADDQ13158 208 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 GNA13Q14344 377 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 LRRC75BQ2VPJ9 315 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 LGALSLQ3ZCW2 172 aaPredicted RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 PYCR3Q53H96 274 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 LPCAT4Q643R3 524 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 C8orf74Q6P047 294 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 GID4Q8IVV7 300 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 C1orf174Q8IYL3 243 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 EIF4E3Q8N5X7 224 aaKnown RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 CCDC112Q8NEF3 446 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 OR8K1Q8NGG5 319 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 ASB17Q8WXJ9 295 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 OPTNQ96CV9 577 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 UPK3BQ9BT76 320 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 MRPS26Q9BYN8 205 aaKnown RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 IQSEC2Q5JU85 1478 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 MYO16Q9Y6X6 1858 aa1.85□□□□□ -2.11
SCFD1-221ENST00000556534 PCF11O94913 1555 aaKnown RBP1.85□□□□□ -2.11
SCFD1-221ENST00000556534 TOP2BQ02880 1626 aa1.84□□□□□ -2.11
SCFD1-221ENST00000556534 ABCC10Q5T3U5 1492 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms