RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SOHLH1Q5JUK2 328 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 HEPN1Q6WQI6 88 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 ITLN1Q8WWA0 313 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 RARRES2Q99969 163 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 NGBQ9NPG2 151 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 TMED3Q9Y3Q3 217 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 MOGAT3Q86VF5 341 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 SLC35G3Q8N808 338 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 PLPPR1Q8TBJ4 325 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 CA5BP1Q8WTZ4 195 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 PLPPR2Q96GM1 343 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 GFOD1Q9NXC2 390 aa14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 PUS1Q9Y606 427 aaKnown RBP eCLIP14.31□□□□□ -0.12
PCDHB17P-201ENST00000539533 PSPNO60542 156 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 IGHV1-46P01743 117 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 EGR1P18146 543 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 UCP3P55916 312 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 FIP1L1Q6UN15 594 aaKnown RBP14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 Q6ZS49 121 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 TP53RKQ96S44 253 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 TRAV39A0A0B4J263 110 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 MEX3BQ6ZN04 569 aaKnown RBP14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 CCDC71LQ8N9Z2 235 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 PRR7Q8TB68 274 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 NEUROG1Q92886 237 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 RIMS4Q9H426 269 aaPredicted RBP14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 SMDT1Q9H4I9 107 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 PRDM13Q9H4Q3 707 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 DOK5Q9P104 306 aa14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 ERRFI1Q9UJM3 462 aaPredicted RBP14.3□□□□□ -0.12
PCDHB17P-201ENST00000539533 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 AADACP22760 399 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 HERV-K104P61576 105 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 SRSF7Q16629 238 aaKnown RBP eCLIP14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 DMRTC2Q8IXT2 367 aaPredicted RBP14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZCCHC24Q8N2G6 241 aaKnown RBP14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR2C3Q8N628 320 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR10D4PQ8NGN7 298 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 C11orf1Q9H5F2 150 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 METRNQ9UJH8 293 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 MMP24Q9Y5R2 645 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 CACNA1DQ01668 2161 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 FAM24AA6NFZ4 105 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 SHISA9B4DS77 424 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 CCL20P78556 96 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 HERPUD1Q15011 391 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 GCSAMQ8N6F7 178 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 OR2G3Q8NGZ4 309 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 RFNGQ9Y644 331 aa14.29□□□□□ -0.12
PCDHB17P-201ENST00000539533 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 CXorf65A6NEN9 183 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 RBFOX3A6NFN3 312 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 SRRM5B3KS81 715 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 TRDCB7Z8K6 153 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 TNFAIP6P98066 277 aaPredicted RBP14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZNF266Q14584 549 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 SMIM21Q3B7S5 101 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 IGSF10Q6WRI0 2623 aa14.28□□□□□ -0.12
PCDHB17P-201ENST00000539533 TRBV6-6A0A0A6YYG2 114 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 IGKV1-6A0A0C4DH72 117 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 IGSF23A1L1A6 192 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 ATP6V0CP27449 155 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 UQCRFS1P47985 274 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZNF124Q15973 351 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZNF674Q2M3X9 581 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 ZNF880Q6PDB4 577 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 ABHD14AQ9BUJ0 271 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 IL19Q9UHD0 177 aa14.27□□□□□ -0.12
PCDHB17P-201ENST00000539533 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 E7EQL1 145 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 MPPED1O15442 326 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 PITX3O75364 302 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 CDS2O95674 445 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST1H1BP16401 226 aaKnown RBP14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 MDH2P40926 338 aaKnown RBP14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 FAM201AQ5SY85 155 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 STX12Q86Y82 276 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 GCM1Q9NP62 436 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIVEP3Q5T1R4 2406 aa14.27□□□□□ -0.13
PCDHB17P-201ENST00000539533 CFAP46Q8IYW2 2715 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 IGHV3OR15-7A0A075B7D8 119 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 KIR2DS1A0A191URI9 304 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 PPYP01298 95 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 CFHR2P36980 270 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 KIR2DS4P43632 304 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 SRPXP78539 464 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 KIR2DS1Q14954 304 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 SPNS3Q6ZMD2 512 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 CD177Q8N6Q3 437 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 TMEM222Q9H0R3 208 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 PLAUP00749 431 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 PSG2P11465 335 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 OMGP23515 440 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 GATA4P43694 442 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 NKX2-1P43699 371 aaPredicted RBP14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 CCL8P80075 99 aa14.26□□□□□ -0.13
PCDHB17P-201ENST00000539533 COL10A1Q03692 680 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms