RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 RPL31P62899 125 aaKnown RBP16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 FAM219AQ8IW50 185 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 TCTEX1D2Q8WW35 142 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 GPR146Q96CH1 333 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 PHYHIPLQ96FC7 376 aa16.65■□□□□ 0.26
ATP1A1-208ENST00000488733 LRRK2Q5S007 2527 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 COL12A1Q99715 3063 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 A0A1W2PPR1 153 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 IGKV1-39P01597 117 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 IGKV1D-39P04432 117 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 AKR1C2P52895 323 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 ID3Q02535 119 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 Q3ZCU0 254 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 CD300LFQ8TDQ1 290 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 LAMP3Q9UQV4 416 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 DSCAML1Q8TD84 2053 aa16.64■□□□□ 0.25
ATP1A1-208ENST00000488733 PITX3O75364 302 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 MMP9P14780 707 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 S100A1P23297 94 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 RPL30P62888 115 aaKnown RBP16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 C11orf71Q6IPW1 123 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 ALKAL2Q6UX46 152 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 LYPD2Q6UXB3 125 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 STOML3Q8TAV4 291 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 NEU4Q8WWR8 484 aaPredicted RBP16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 ABHD14AQ9BUJ0 271 aa16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 RCL1Q9Y2P8 373 aaKnown RBP16.63■□□□□ 0.25
ATP1A1-208ENST00000488733 DVL1O14640 695 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 COL8A2P25067 703 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 EIF5AP63241 154 aaKnown RBP16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 MRPS11P82912 194 aaKnown RBP16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 BTNL3Q6UXE8 466 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 DTX2Q86UW9 622 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 SPAG16Q8N0X2 631 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 SPOCK3Q9BQ16 436 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 RPUSD1Q9UJJ7 312 aaKnown RBP16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 GPR137BO60478 399 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 GOSR1O95249 250 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 IGKV1-5P01602 117 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 TPT1P13693 172 aaKnown RBP16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 ZNF134P52741 427 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 FGFRL1Q8N441 504 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 DMBX1Q8NFW5 382 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 ZNF714Q96N38 554 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 IFI27L2Q9H2X8 130 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 C19orf12Q9NSK7 152 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 MMP24Q9Y5R2 645 aa16.62■□□□□ 0.25
ATP1A1-208ENST00000488733 HRNRQ86YZ3 2850 aaPredicted RBP16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 A0A0G2JRQ6 117 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 RPS10-NUDT3A0A1W2PQS6 291 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 LINC00862A6NCI5 91 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 DANCRP0C864 163 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 NFYBP25208 207 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 DUTP33316 252 aaKnown RBP16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 CT45A1Q5HYN5 189 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 CXorf66Q5JRM2 361 aaPredicted RBP16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 TMEM200BQ69YZ2 307 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 CT45A3Q8NHU0 189 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 RAB39BQ96DA2 213 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 CYTL1Q9NRR1 136 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 COA4Q9NYJ1 87 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 CTSZQ9UBR2 303 aa16.61■□□□□ 0.25
ATP1A1-208ENST00000488733 C17orf98A8MV24 154 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 WRBO00258 174 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 SOD3P08294 240 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 DAOP14920 347 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 EPHA1P21709 976 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 POLR2GP62487 172 aaKnown RBP eCLIP16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 VAMP2P63027 116 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 HEPN1Q6WQI6 88 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 ZNF439Q8NDP4 499 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 H1FXQ92522 213 aaKnown RBP16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 C11orf1Q9H5F2 150 aa16.6■□□□□ 0.25
ATP1A1-208ENST00000488733 LINC00473A8K010 186 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 RAB29O14966 203 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 RAMP3O60896 148 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 IGHV2-70P01814 119 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 ZNF273Q14593 569 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 BAP18Q8IXM2 172 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 UBTD1Q9HAC8 227 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 CACNG5Q9UF02 275 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 PRELID3BQ9Y3B1 194 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 TRBV23-1A0A0A0MS06 115 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 M0R1X1 148 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 GPR37O15354 613 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 RBFOX2O43251 390 aaKnown RBP eCLIP16.59■□□□□ 0.254e-8■■■□□ 15.7
ATP1A1-208ENST00000488733 PROP1O75360 226 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 FCN3O75636 299 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 PLA2G2AP14555 144 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 KIR2DS2P43631 304 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 SLC25A32Q9H2D1 315 aa16.59■□□□□ 0.25
ATP1A1-208ENST00000488733 LYNX1G3V0Z9 82 aa16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 SLC31A2O15432 143 aa16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 GAPDHP04406 335 aaKnown RBP16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 LYNX1P0DP58 116 aa16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 TMEM33P57088 247 aa16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 BRWD1-AS2P59051 145 aa16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 ZNF816Q0VGE8 651 aaPredicted RBP16.58■□□□□ 0.24
ATP1A1-208ENST00000488733 PRAMEF5Q5TYX0 476 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms