RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 OR1E3Q8WZA6 343 aa11.73□□□□□ -0.53
HDAC1-206ENST00000476391 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
HDAC1-206ENST00000476391 NUDT22Q9BRQ3 303 aa11.73□□□□□ -0.53
HDAC1-206ENST00000476391 MTIF3Q9H2K0 278 aaKnown RBP11.73□□□□□ -0.53
HDAC1-206ENST00000476391 BRCA2P51587 3418 aa11.73□□□□□ -0.53
HDAC1-206ENST00000476391 TDRD6O60522 2096 aaKnown RBP11.73□□□□□ -0.53
HDAC1-206ENST00000476391 LIPT2A6NK58 231 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 OR7C2O60412 319 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 CRYAAP02489 173 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 IGKV3-11P04433 115 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 ATP5G3P48201 142 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 TRIP6Q15654 476 aaKnown RBP11.72□□□□□ -0.53
HDAC1-206ENST00000476391 BVES-AS1Q5T3Y7 98 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 LHFPL2Q6ZUX7 228 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 DTX1Q86Y01 620 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 ARHGEF17Q96PE2 2063 aaPredicted RBP11.72□□□□□ -0.53
HDAC1-206ENST00000476391 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
HDAC1-206ENST00000476391 IGKV1-27A0A075B6S5 117 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 A0A1W2PQU0 124 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 F5H5K5 113 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 M0R1X1 148 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 SCGB1A1P11684 91 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 PSG9Q00887 426 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 OCC1Q8TAD7 63 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 TSKUQ8WUA8 353 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 FAM131CQ96AQ9 280 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 TMEM147Q9BVK8 224 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 PNO1Q9NRX1 252 aaKnown RBP11.72□□□□□ -0.53
HDAC1-206ENST00000476391 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
HDAC1-206ENST00000476391 NAT8BQ9UHF3 227 aa11.72□□□□□ -0.53
HDAC1-206ENST00000476391 CD5LO43866 347 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 SAP30O75446 220 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 HTD2P86397 168 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 PMP22Q01453 160 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 RD3Q7Z3Z2 195 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 FER1L6-AS1Q8NA97 138 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 BORCS8Q96FH0 119 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 SMPXQ9UHP9 88 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.53
HDAC1-206ENST00000476391 IGKV1-12A0A0C4DH73 117 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 ADH1BP00325 375 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 IGKV1D-12P01611 117 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 LGALS7P47929 136 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 DUSP3P51452 185 aaPredicted RBP11.71□□□□□ -0.54
HDAC1-206ENST00000476391 GAB4Q2WGN9 574 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 HLA-DQA1Q5Y7H0 255 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 SCCPDHQ8NBX0 429 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 GJC3Q8NFK1 279 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 RDH5Q92781 318 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 RAB1CQ92928 201 aa11.71□□□□□ -0.54
HDAC1-206ENST00000476391 GJE1A6NN92 205 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 FAM90A26D6RGX4 464 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 CD38P28907 300 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 OTX1P32242 354 aaPredicted RBP11.7□□□□□ -0.54
HDAC1-206ENST00000476391 RBM11P57052 281 aaKnown RBP11.7□□□□□ -0.54
HDAC1-206ENST00000476391 SELENOVP59797 346 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 IZUMO4Q1ZYL8 232 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 PRAMEF20Q5VT98 475 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 SAMD13Q5VXD3 122 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 SARAFQ96BY9 339 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 ST20Q9HBF5 79 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 NUDT3O95989 172 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 LINC00869P0C866 280 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 PSG2P11465 335 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 PLA2G5P39877 138 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 THBS3P49746 956 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 MYBPHQ13203 477 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 TBR1Q16650 682 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 OR10G3Q8NGC4 313 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 TMEM186Q96B77 213 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 MMABQ96EY8 250 aaPredicted RBP11.7□□□□□ -0.54
HDAC1-206ENST00000476391 LY96Q9Y6Y9 160 aa11.7□□□□□ -0.54
HDAC1-206ENST00000476391 KIR2DS1A0A191URI9 304 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 SCTP09683 121 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 KIR2DS4P43632 304 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 HLA-BQ31612 363 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 WFDC8Q8IUA0 241 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 CPT1CQ8TCG5 803 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 NPCDR1Q9BY65 106 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 LRP5LA4QPB2 252 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 SLC17A3O00476 420 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 FUT6P51993 359 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 PPP1CAP62136 330 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 CX3CL1P78423 397 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 RELBQ01201 579 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 IGFBP7Q16270 282 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 TMEM136Q6ZRR5 245 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 OR8B3Q8NGG8 313 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 OR2Y1Q8NGV0 311 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 NINJ1Q92982 152 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 OR8B2Q96RD0 313 aa11.69□□□□□ -0.54
HDAC1-206ENST00000476391 HES4Q9HCC6 221 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms