RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 C11orf54Q9H0W9 315 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 ISYNA1Q9NPH2 558 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF355PQ9NSJ1 428 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 METTL1Q9UBP6 276 aaKnown RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF221Q9UK13 617 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF580Q9UK33 172 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 FOXA2Q9Y261 457 aaPredicted RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 LSM4Q9Y4Z0 139 aaKnown RBP9.27□□□□□ -0.93
SMPD4-217ENST00000473720 U3KQK5 164 aa9.27□□□□□ -0.93
SMPD4-217ENST00000473720 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 A0A087WW49 117 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 LINC01619G3V211 115 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 RGS10O43665 173 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 CA2P00918 260 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 MC5RP33032 325 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 MAP2K4P45985 399 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 TPPP2P59282 170 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 TMEM267Q0VDI3 215 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-217ENST00000473720 IRF3Q14653 427 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 ACTBL2Q562R1 376 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-217ENST00000473720 PPP1R27Q86WC6 154 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 MINDY2Q8NBR6 621 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 LFNGQ8NES3 379 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 NRG4Q8WWG1 115 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 EDARADDQ8WWZ3 215 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 DLX4Q92988 240 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-217ENST00000473720 RIMS4Q9H426 269 aaPredicted RBP9.26□□□□□ -0.93
SMPD4-217ENST00000473720 Q9N2K0 584 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 C12orf4Q9NQ89 552 aa9.26□□□□□ -0.93
SMPD4-217ENST00000473720 A0A075B6Q4 140 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 M0R1X1 148 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 BET1O15155 118 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 DENRO43583 198 aaKnown RBP9.25□□□□□ -0.93
SMPD4-217ENST00000473720 ARL6IP5O75915 188 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 CD3GP09693 182 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 NHLRC4P0CG21 123 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-217ENST00000473720 EGR2P11161 476 aaPredicted RBP9.25□□□□□ -0.93
SMPD4-217ENST00000473720 TMEM50BP56557 158 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 MRPS15P82914 257 aaKnown RBP9.25□□□□□ -0.93
SMPD4-217ENST00000473720 RUNX1Q01196 453 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 FABP5Q01469 135 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 PLA2G7Q13093 441 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 C2orf76Q3KRA6 126 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF383Q8NA42 475 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 GRPEL2Q8TAA5 225 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 MAFIPQ8WZ33 124 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 FAM3DQ96BQ1 224 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 AGMATQ9BSE5 352 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 MGAT4AQ9UM21 535 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 NUBP2Q9Y5Y2 271 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 V9GY05 133 aa9.25□□□□□ -0.93
SMPD4-217ENST00000473720 TNCP24821 2201 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TRBV6-6A0A0A6YYG2 114 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TMEM272A0A1B0GTI8 110 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 SLC25A17O43808 307 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 RBBP9O75884 186 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 APOA2P02652 100 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TRGV3P03979 118 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 IGKV1-16P04430 117 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
SMPD4-217ENST00000473720 SPNP16150 400 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 CD40LGP29965 261 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 INSL3P51460 131 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 MLLT11Q13015 90 aaPredicted RBP9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TPBGQ13641 420 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 PSG5Q15238 335 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TRAM1Q15629 374 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 C19orf54Q5BKX5 351 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 PLAC9Q5JTB6 97 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 OVCH2Q7RTZ1 564 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 HAPLN4Q86UW8 402 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 ZNF429Q86V71 674 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 FAM89BQ8N5H3 189 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 OR56B1Q8NGI3 324 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 OR5AN1Q8NGI8 311 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 ARPC1AQ92747 370 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 MGLLQ99685 303 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 RSRP1Q9BUV0 290 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 TOLLIPQ9H0E2 274 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 SLC35D1Q9NTN3 355 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 RDH8Q9NYR8 311 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 HSF4Q9ULV5 492 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 RBM7Q9Y580 266 aaKnown RBP9.24□□□□□ -0.93
SMPD4-217ENST00000473720 SMAD5-AS1Q9Y6J3 95 aa9.24□□□□□ -0.93
SMPD4-217ENST00000473720 DNAH9Q9NYC9 4486 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 TRDCB7Z8K6 153 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 ITGB1BP1O14713 200 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 PROP1O75360 226 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 CNIH1O95406 144 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 TFAP2AP05549 437 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 CD37P11049 281 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 PSMA1P25786 263 aaKnown RBP9.23□□□□□ -0.93
SMPD4-217ENST00000473720 CRIP2P52943 208 aaPredicted RBP9.23□□□□□ -0.93
SMPD4-217ENST00000473720 PITPNAQ00169 270 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 DEFA5Q01523 94 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 FXYD3Q14802 87 aa9.23□□□□□ -0.93
SMPD4-217ENST00000473720 SRSF7Q16629 238 aaKnown RBP eCLIP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms