RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 KIR2DS2P43631 304 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 DEFA5Q01523 94 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 HMGN3Q15651 99 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 GUCA2BQ16661 112 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 SIGIRRQ6IA17 410 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 ZDHHC13Q8IUH4 622 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 GPR148Q8TDV2 347 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 DYNLRB2Q8TF09 96 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 LGALS12Q96DT0 336 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 TECRQ9NZ01 308 aaKnown RBP6.31□□□□□ -1.4
SCFD1-202ENST00000396629 DNAH17Q9UFH2 4485 aa6.31□□□□□ -1.4
SCFD1-202ENST00000396629 A0A0B4J203 849 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 UBE2QL1A1L167 161 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 MSGN1A6NI15 193 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 ITGB1BP1O14713 200 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 RBMXL2O75526 392 aaKnown RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 IGFBP3P17936 291 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 GBX2P52951 348 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 SNRPGP62308 76 aaKnown RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 PPP3R1P63098 170 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 C6orf141Q5SZD1 244 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 MEDAGQ5VYS4 303 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 STEAP1Q9UHE8 339 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 CRYGBP07316 175 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 LGALS7P47929 136 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 RPS16P62249 146 aaKnown RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 SLC16A13Q7RTY0 426 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 PHLDA1Q8WV24 401 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 WDR89Q96FK6 387 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 ZNF184Q99676 751 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-202ENST00000396629 SULT4A1Q9BR01 284 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 AGMATQ9BSE5 352 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 ERVK13-1Q9NX77 482 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 POMPQ9Y244 141 aa6.3□□□□□ -1.4
SCFD1-202ENST00000396629 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
SCFD1-202ENST00000396629 C2orf70A6NJV1 201 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 SPRY2O43597 315 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PROP1O75360 226 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 IGKV1-16P04430 117 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 FOLR2P14207 255 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 CPEP16870 476 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 EDN2P20800 178 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 BMI1P35226 326 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 GTF2A1P52655 376 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-202ENST00000396629 GYS2P54840 703 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PRR20EP86478 221 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PRR20CP86479 221 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PRR20DP86480 221 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PRR20BP86481 221 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 PRR20AP86496 221 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 RIPK1Q13546 671 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 GLIPR1L1Q6UWM5 242 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 Q6ZWC4 215 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 ABHD14BQ96IU4 210 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 Q96M66 194 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 BANF2Q9H503 90 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 IMPAD1Q9NX62 359 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 COA4Q9NYJ1 87 aa6.29□□□□□ -1.4
SCFD1-202ENST00000396629 H3BNX3 289 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 PDCD6O75340 191 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 IGLV2-23P01705 113 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 MED14OSP0DP75 135 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 MGMTP16455 207 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 CAPGP40121 348 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 PJVKQ0ZLH3 352 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 RPL22L1Q6P5R6 122 aaKnown RBP6.28□□□□□ -1.4
SCFD1-202ENST00000396629 AMIGO2Q86SJ2 522 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 PDPNQ86YL7 162 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ZNF383Q8NA42 475 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 MUL1Q969V5 352 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ORAI1Q96D31 301 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 SELENOIQ9C0D9 397 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ABRACLQ9P1F3 81 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 DMRT1Q9Y5R6 373 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 FAT2Q9NYQ8 4349 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.28□□□□□ -1.4
SCFD1-202ENST00000396629 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 SNTNA6NMZ2 147 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 LGALS9O00182 355 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 BAG2O95816 211 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 FASP25445 335 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 LINC00205P59089 165 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 EXOSC2Q13868 293 aaKnown RBP6.28□□□□□ -1.4
SCFD1-202ENST00000396629 CCDC58Q4VC31 144 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ZNF880Q6PDB4 577 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ADAD2Q8NCV1 583 aaKnown RBP6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 AKIP1Q9NQ31 210 aa6.28□□□□□ -1.4
SCFD1-202ENST00000396629 ZNF230Q9UIE0 474 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-202ENST00000396629 TRBV9A0A0B4J1U6 114 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 TRBV5-5A0A0J9YX44 114 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 FAM223BA6NKX1 122 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 UBE2CO00762 179 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 MRGPRG-AS1Q2M3A8 158 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 XAF1Q6GPH4 301 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 FAM223AQ8IWN6 122 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 CDH26Q8IXH8 852 aa6.27□□□□□ -1.41
SCFD1-202ENST00000396629 TMEM217Q8N7C4 229 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms