RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 ORAI1Q96D31 301 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 RP1P56715 2156 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 H2AFB1P0C5Y9 115 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 CDK5Q00535 292 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 KLRD1Q13241 179 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 ZNF56Q15929 161 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 TMEM249Q2WGJ8 235 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 ZNF705AQ6ZN79 300 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 MDS2Q8NDY4 140 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 PKIBQ9C010 78 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 DCAF16Q9NXF7 216 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 KIAA1551Q9HCM1 1747 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 NCOR1O75376 2440 aa7.81□□□□□ -1.16
LIMCH1-202ENST00000381753 C3orf85A0A1B0GTC6 90 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SYNGR2O43760 224 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 PLAUP00749 431 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SEC11BP0C7V7 166 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 TCF23Q7RTU1 214 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 LSMEM1Q8N8F7 131 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 ANKRD60Q9BZ19 345 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 WNT10AQ9GZT5 417 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 AUNIPQ9H7T9 357 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 HINT1P49773 126 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SPNS2Q8IVW8 549 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 WNT5BQ9H1J7 359 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 CHST2Q9Y4C5 530 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 NBR2O15453 112 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 HIST1H1DP16402 221 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 CLDND2Q8NHS1 167 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 NEURL2Q9BR09 285 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 RCL1Q9Y2P8 373 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 NSG2Q9Y328 171 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 LIMS3P0CW19 117 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 LIMS4P0CW20 117 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 RIPPLY3P57055 190 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC38A11Q08AI6 406 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SMN1Q16637 294 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 LEMD1Q68G75 181 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 WDR73Q6P4I2 378 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC24A4Q8NFF2 622 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 RPRMQ9NS64 109 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 AK3Q9UIJ7 227 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 ANXA10Q9UJ72 324 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
LIMCH1-202ENST00000381753 J3QR89 54 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 CRISP2P16562 243 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PTGDSP41222 190 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 FFAR4Q5NUL3 377 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 FA2HQ7L5A8 372 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 GATA6Q92908 595 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PHLDA3Q9Y5J5 127 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 SHROOM3Q8TF72 1996 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 RPL36A-HNRNPH2H7BZ11 118 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 GLIPR1P48060 266 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 ENDOGQ14249 297 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PAXXQ9BUH6 204 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 IGLV3-12A0A075B6K2 115 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PLPP2O43688 288 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 NTF3P20783 257 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 TMEM54Q969K7 222 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 QTRT1Q9BXR0 403 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 CHST5Q9GZS9 411 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 AKIP1Q9NQ31 210 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PPP5D1E7EU14 171 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 HSD17B13Q7Z5P4 300 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 KCNRGQ8N5I3 272 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 TMPRSS5Q9H3S3 457 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 JPT1Q9UK76 154 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 KIF13BQ9NQT8 1826 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 DUSP14O95147 198 aaKnown RBP7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 IGHV1-46P01743 117 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 SLC6A1P30531 599 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 UNC119Q13432 240 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 PEAR1Q5VY43 1037 aaPredicted RBP7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 FAM206AQ9NX38 181 aa7.79□□□□□ -1.16
LIMCH1-202ENST00000381753 OVOL1O14753 267 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 COL8A2P25067 703 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 ETV1P50549 477 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 DAD1P61803 113 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 ZNF154Q13106 437 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 DLEU7Q6UYE1 221 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SCN1AP35498 2009 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 PCM1Q15154 2024 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 A0A087WX48 190 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 GATCO43716 136 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TDGF1P13385 188 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 C21orf62-AS1Q17RA5 79 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SP6Q3SY56 376 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TMEM177Q53S58 311 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 LSM10Q969L4 123 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TMEM133Q9H2Q1 129 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 TECRQ9NZ01 308 aaKnown RBP7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 LINC00312Q9Y6C7 94 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 RALGAPA1Q6GYQ0 2036 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 SCN5AQ14524 2016 aa7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 IL6RP08887 468 aaPredicted RBP7.78□□□□□ -1.16
LIMCH1-202ENST00000381753 OR4E1P0C645 316 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms