RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 METRNQ9UJH8 293 aa17.98■□□□□ 0.47
TRIM54-202ENST00000380075 IGLV3-9A0A075B6K5 115 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 GZMHP20718 246 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 PPT1P50897 306 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 AKR1C8PQ5T2L2 129 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 VKORC1Q9BQB6 163 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 MGST3O14880 152 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 F12P00748 615 aaPredicted RBP17.97■□□□□ 0.47
TRIM54-202ENST00000380075 MSMPQ1L6U9 139 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 IZUMO4Q1ZYL8 232 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 EDARADDQ8WWZ3 215 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 MEGF10Q96KG7 1140 aa17.97■□□□□ 0.47
TRIM54-202ENST00000380075 HSD17B10Q99714 261 aaKnown RBP17.97■□□□□ 0.47
TRIM54-202ENST00000380075 INTS1Q8N201 2190 aaKnown RBP17.96■□□□□ 0.47
TRIM54-202ENST00000380075 C15orf65H3BRN8 121 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 J3QKU1 62 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 P0C879 139 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 CR1LQ2VPA4 569 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 TMEM88Q6PEY1 159 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 LRP11Q86VZ4 500 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 PARD6GQ9BYG4 376 aaPredicted RBP17.96■□□□□ 0.47
TRIM54-202ENST00000380075 RNF150Q9ULK6 438 aa17.96■□□□□ 0.47
TRIM54-202ENST00000380075 OR8U8P0C7N1 319 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 EGR1P18146 543 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 PPP1CCP36873 323 aaKnown RBP17.95■□□□□ 0.46
TRIM54-202ENST00000380075 SELENOVP59797 346 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 RAB2AP61019 212 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 TLE4Q04727 773 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 C4orf17Q53FE4 359 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 FAM122CQ6P4D5 195 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 NCOR1P1Q9H4R4 102 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 IGKV1D-17A0A075B6S4 117 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 H3BP45 60 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 HBE1P02100 147 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 SSTR5P35346 364 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 GATA4P43694 442 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 TMEM267Q0VDI3 215 aaPredicted RBP17.95■□□□□ 0.46
TRIM54-202ENST00000380075 SLC25A24Q6NUK1 477 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 CBLN2Q8IUK8 224 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 SCGB1C1Q8TD33 95 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 C5orf30Q96GV9 206 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 OR2V2Q96R30 315 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 SLC35B3Q9H1N7 401 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 KIAA1456Q9P272 454 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 HSPB7Q9UBY9 170 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 JPT1Q9UK76 154 aa17.95■□□□□ 0.46
TRIM54-202ENST00000380075 UBR5O95071 2799 aaPredicted RBP17.95■□□□□ 0.46
TRIM54-202ENST00000380075 A8MXE2 369 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 CLDN14O95500 239 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 CLDN1O95832 211 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 IAPPP10997 89 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 UBE2KP61086 200 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 RPL30P62888 115 aaKnown RBP17.94■□□□□ 0.46
TRIM54-202ENST00000380075 HOXA4Q00056 320 aaPredicted RBP17.94■□□□□ 0.46
TRIM54-202ENST00000380075 TNFRSF9Q07011 255 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 ZNF808Q8N4W9 903 aaPredicted RBP17.94■□□□□ 0.46
TRIM54-202ENST00000380075 GCSAMQ8N6F7 178 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 CD300LFQ8TDQ1 290 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 TCTEX1D2Q8WW35 142 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 PSMG3Q9BT73 122 aaPredicted RBP17.94■□□□□ 0.46
TRIM54-202ENST00000380075 MYO18BQ8IUG5 2567 aa17.94■□□□□ 0.46
TRIM54-202ENST00000380075 ODAMA1E959 279 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 H7C2Y5 167 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 RAB9BQ9NP90 201 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 KCNJ16Q9NPI9 418 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.93■□□□□ 0.46
TRIM54-202ENST00000380075 RAB29O14966 203 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 LHBP01229 141 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 TFF1P04155 84 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 PAX6P26367 422 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 RUNX1Q01196 453 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 HFEQ30201 348 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 SP5Q6BEB4 398 aaPredicted RBP17.93■□□□□ 0.46
TRIM54-202ENST00000380075 SPSB3Q6PJ21 355 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 ZNF525Q8N782 197 aa17.93■□□□□ 0.46
TRIM54-202ENST00000380075 RBMXL1Q96E39 390 aaKnown RBP17.93■□□□□ 0.46
TRIM54-202ENST00000380075 RAMP3O60896 148 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 FLI1Q01543 452 aaPredicted RBP17.92■□□□□ 0.46
TRIM54-202ENST00000380075 EDDM3AQ14507 147 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 SMUG1Q53HV7 270 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 TPRX1Q8N7U7 411 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 UNKLQ9H9P5 680 aaKnown RBP17.92■□□□□ 0.46
TRIM54-202ENST00000380075 SMCO4Q9NRQ5 59 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 FLNCQ14315 2725 aa17.92■□□□□ 0.46
TRIM54-202ENST00000380075 HIVEP3Q5T1R4 2406 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 A0A0G2JNJ9 132 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 YPEL1O60688 119 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 METTL15P1P0C7V9 234 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 ADORA2A-AS1P86434 159 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 ALKBH2Q6NS38 261 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 MRGPRGQ86SM5 289 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 MOGAT3Q86VF5 341 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 YPEL2Q96QA6 119 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 AGMATQ9BSE5 352 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 Q9UFV3 132 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 FBXO7Q9Y3I1 522 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 TRAV1-1A0A0B4J248 108 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 RBFOX3A6NFN3 312 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 LRRC30A6NM36 301 aa17.91■□□□□ 0.46
TRIM54-202ENST00000380075 PPIHO43447 177 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms