RNA–Protein interactions for RNA: ENST00000373163.5

TRAPPC3-203, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-203ENST00000373163 RIPK1Q13546 671 aa11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 EXOSC2Q13868 293 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 GPR176Q14439 515 aa11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 MRPL48Q96GC5 212 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 CYYR1Q96J86 154 aa11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 ISG20L2Q9H9L3 353 aaKnown RBP11.67□□□□□ -0.54
TRAPPC3-203ENST00000373163 E9PI62 339 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 G3V2T6 193 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 GPX5O75715 221 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 CD2P06729 351 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 DRAXINQ8NBI3 349 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 IL1F10Q8WWZ1 152 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 THRSPQ92748 146 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 ABHD14BQ96IU4 210 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 NSL1Q96IY1 281 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 ZNF230Q9UIE0 474 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 ARL2BPQ9Y2Y0 163 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 LRRC42Q9Y546 428 aa11.66□□□□□ -0.54
TRAPPC3-203ENST00000373163 UBE2CO00762 179 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 APELAP0DMC3 54 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 BDKRB2P30411 391 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 TM4SF20Q53R12 229 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 ZNF57Q68EA5 555 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 LHFPL3Q86UP9 236 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 SYS1Q8N2H4 156 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 KCNG3Q8TAE7 436 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 CACNG8Q8WXS5 425 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 RNF183Q96D59 192 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 MYCBPQ99417 103 aaPredicted RBP11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 CIB1Q99828 191 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 SULT4A1Q9BR01 284 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 ABRACLQ9P1F3 81 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 PKHD1P08F94 4074 aa11.65□□□□□ -0.54
TRAPPC3-203ENST00000373163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 XRCC3O43542 346 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 TUSC2O75896 110 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 SCAF4O95104 1147 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 IFNA4P05014 189 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 GLAP06280 429 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 FUT3P21217 361 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 CBLN1P23435 193 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 TCTAP57738 103 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 RHOGP84095 191 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 ATP5G2Q06055 141 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 HMGN3Q15651 99 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 PDPNQ86YL7 162 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 ADAD2Q8NCV1 583 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 GPR148Q8TDV2 347 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 C2CD4CQ8TF44 421 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 PHB2Q99623 299 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 ZNF184Q99676 751 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
TRAPPC3-203ENST00000373163 TCRBV3S1A0A5B6 114 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 FAM90A7PA6NKC0 464 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 LGALS9O00182 355 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 BAG2O95816 211 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 LINC00205P59089 165 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 NANOS2P60321 138 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 FLOT2Q14254 428 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 RBMS2Q15434 407 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 SIGIRRQ6IA17 410 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 GLIPR1L1Q6UWM5 242 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 OR14A2Q96R54 314 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 GABARAPL3Q9BY60 117 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 SELENOIQ9C0D9 397 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 GABARAPL1Q9H0R8 117 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 BANF2Q9H503 90 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 MLXQ9UH92 298 aa11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 EXOGQ9Y2C4 368 aaKnown RBP11.63□□□□□ -0.55
TRAPPC3-203ENST00000373163 FAT2Q9NYQ8 4349 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 PPP5D1E7EU14 171 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 APOA2P02652 100 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 PRH1P02810 166 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 OR9G9P0C7N8 305 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 CTRB1P17538 263 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 GBX2P52951 348 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 HSP90B2PQ58FF3 399 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 CTRB2Q6GPI1 263 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 ZDHHC13Q8IUH4 622 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 GVQW1Q8N7I0 195 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 STPG3Q8N7X2 389 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 FBLIM1Q8WUP2 373 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 MUL1Q969V5 352 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 AGMATQ9BSE5 352 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 IMPAD1Q9NX62 359 aa11.62□□□□□ -0.55
TRAPPC3-203ENST00000373163 KIR2DL5BA0A0G2JN68 375 aa11.61□□□□□ -0.55
TRAPPC3-203ENST00000373163 KIR2DL5BA0A0G2JPC4 375 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms