RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
CHD4-201ENST00000357008 POC1AQ8NBT0 407 aa12.82□□□□□ -0.36
CHD4-201ENST00000357008 PTPRZ1P23471 2315 aaPredicted RBP12.81□□□□□ -0.36
CHD4-201ENST00000357008 KBTBD11O94819 623 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 RPL27AP46776 148 aaKnown RBP12.81□□□□□ -0.36
CHD4-201ENST00000357008 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
CHD4-201ENST00000357008 TPRX1Q8N7U7 411 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 OR1N2Q8NGR9 330 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 FSCN3Q9NQT6 498 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 NPIPB9F8W1W9 429 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 REG1BP48304 166 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 PLP1P60201 277 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 MIC13Q5XKP0 118 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
CHD4-201ENST00000357008 SH3BGRL3Q9H299 93 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 LHFPL6Q9Y693 200 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 IGHV3-21A0A0B4J1V1 117 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 C5orf67F2Z3F1 127 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 ID4P47928 161 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 UNC119Q13432 240 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 DCAF10Q5QP82 559 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 CCDC144NLQ6NUI1 221 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 PARD6GQ9BYG4 376 aaPredicted RBP12.81□□□□□ -0.36
CHD4-201ENST00000357008 RTP5Q14D33 572 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 SLC25A34Q6PIV7 304 aa12.81□□□□□ -0.36
CHD4-201ENST00000357008 PPIAL4EA0A075B759 164 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 PPIAL4DF5H284 164 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 PPIAL4FP0DN26 164 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 MPV17P39210 176 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 PPIAL4AQ9Y536 164 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 FOCADQ5VW36 1801 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 PAPPAQ13219 1627 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 MC5RP33032 325 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 UQCRFS1P47985 274 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 UCP2P55851 309 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 CDX2Q99626 313 aaPredicted RBP12.8□□□□□ -0.36
CHD4-201ENST00000357008 GGACTQ9BVM4 153 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 TTTY12Q9BZ98 90 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 G6PC2Q9NQR9 355 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 CRXO43186 299 aaPredicted RBP12.8□□□□□ -0.36
CHD4-201ENST00000357008 FOLR2P14207 255 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 UCP3P55916 312 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 LINC01590Q5TEZ4 76 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 Q96M66 194 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 PKIBQ9C010 78 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 TPRP12270 2363 aaKnown RBP12.8□□□□□ -0.36
CHD4-201ENST00000357008 DLL1O00548 723 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 IGHV4-34P06331 123 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 MUC15Q8N387 334 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 HSPB7Q9UBY9 170 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 TMEM14DPA8MWL7 114 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 TNFRSF9Q07011 255 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 TMEM187Q14656 261 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 ZNF362Q5T0B9 420 aaPredicted RBP12.8□□□□□ -0.36
CHD4-201ENST00000357008 ZNF502Q8TBZ5 544 aa12.8□□□□□ -0.36
CHD4-201ENST00000357008 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
CHD4-201ENST00000357008 PGPA6NDG6 321 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 CKS2P33552 79 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 LSM10Q969L4 123 aaKnown RBP12.79□□□□□ -0.36
CHD4-201ENST00000357008 SPSB4Q96A44 273 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 R4GN57 208 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.79□□□□□ -0.36
CHD4-201ENST00000357008 SAXO1Q8IYX7 474 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 OR10S1Q8NGN2 331 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 ZNF714Q96N38 554 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 DUSP15Q9H1R2 295 aaPredicted RBP12.79□□□□□ -0.36
CHD4-201ENST00000357008 SMOC1Q9H4F8 434 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 CD82P27701 267 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 NHSL1Q5SYE7 1610 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 MAS1LP35410 378 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 REC114Q7Z4M0 266 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 RAB37Q96AX2 223 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 SMIM8Q96KF7 97 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 PARLQ9H300 379 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 DLL3Q9NYJ7 618 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
CHD4-201ENST00000357008 ZNF430Q9H8G1 570 aaPredicted RBP12.79□□□□□ -0.36
CHD4-201ENST00000357008 CARHSP1Q9Y2V2 147 aaKnown RBP12.79□□□□□ -0.36
CHD4-201ENST00000357008 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
CHD4-201ENST00000357008 SOD3P08294 240 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 TCTAP57738 103 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 IZUMO4Q1ZYL8 232 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 C16orf97H3BN30 126 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 ZNF708P17019 499 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 RPL8P62917 257 aaKnown RBP12.78□□□□□ -0.36
CHD4-201ENST00000357008 TRBV23-1A0A0A0MS06 115 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 BTF3P20290 206 aaKnown RBP12.78□□□□□ -0.36
CHD4-201ENST00000357008 GCSHP23434 173 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 SRIP30626 198 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 CBLN4Q9NTU7 201 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 SEC16AO15027 2179 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 SNRPCP09234 159 aaKnown RBP12.78□□□□□ -0.36
CHD4-201ENST00000357008 C8orf88P0DMB2 117 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 ID1P41134 155 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 ERASQ7Z444 233 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
CHD4-201ENST00000357008 RABAC1Q9UI14 185 aa12.78□□□□□ -0.36
CHD4-201ENST00000357008 COX6CP09669 75 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms