RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PDE6DO43924 150 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 ADMP35318 185 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 SELENOTP62341 195 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 RIPPLY2Q5TAB7 128 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 DMXL1Q9Y485 3027 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 ESDP10768 282 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 MPLP40238 635 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 TMEM183BQ1AE95 376 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 TDRG1Q3Y452 100 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 FGFRL1Q8N441 504 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 CPEB3Q8NE35 698 aaKnown RBP13.74□□□□□ -0.21
UPK3B-202ENST00000334348 IL1F10Q8WWZ1 152 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 OR2J1Q9GZK6 312 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 OR51B6Q9H340 312 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 ADAMTS20P59510 1910 aa13.74□□□□□ -0.21
UPK3B-202ENST00000334348 TRAV24A0A0B4J272 114 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 IL6RP08887 468 aaPredicted RBP13.73□□□□□ -0.21
UPK3B-202ENST00000334348 ZNF16P17020 682 aaPredicted RBP13.73□□□□□ -0.21
UPK3B-202ENST00000334348 PCP4P48539 62 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 TNFSF10P50591 281 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 GNB1P62873 340 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 PMP22Q01453 160 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 C21orf62-AS1Q17RA5 79 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 SGMS2Q8NHU3 365 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 RDH5Q92781 318 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 HSPB7Q9UBY9 170 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 GPR179Q6PRD1 2367 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 SYNGR1O43759 233 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 UMODP07911 640 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 SELEP16581 610 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 NUFIP2Q7Z417 695 aaKnown RBP13.73□□□□□ -0.21
UPK3B-202ENST00000334348 SPEM1Q8N4L4 309 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 OPN3Q9H1Y3 402 aaPredicted RBP13.73□□□□□ -0.21
UPK3B-202ENST00000334348 TP53TG3Q9ULZ0 132 aa13.73□□□□□ -0.21
UPK3B-202ENST00000334348 PMS2P5A8MQ11 134 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 G3V3Y1 287 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 SERPINA7P05543 415 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 C1QTNF9P0C862 333 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 CD33P20138 364 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 OR5P3Q8WZ94 311 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 SFRP2Q96HF1 295 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 NPCDR1Q9BY65 106 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 A0A1W2PR80 420 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 K7ESF4 209 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 CBR3O75828 277 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 CELA2AP08217 269 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
UPK3B-202ENST00000334348 CXCL12P48061 93 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 CARD18P57730 90 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 PCOLCEQ15113 449 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 TCF23Q7RTU1 214 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 SLC25A45Q8N413 288 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 OR10P1Q8NGE3 313 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 ZDHHC11Q9H8X9 412 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 RYDENQ9NUL5 291 aaKnown RBP13.72□□□□□ -0.21
UPK3B-202ENST00000334348 AURKAIP1Q9NWT8 199 aaPredicted RBP13.72□□□□□ -0.21
UPK3B-202ENST00000334348 RARRES3Q9UL19 164 aa13.72□□□□□ -0.21
UPK3B-202ENST00000334348 ZNF318Q5VUA4 2279 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 GRIFINA4D1Z8 144 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 TFF3Q07654 80 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 TMEM249Q2WGJ8 235 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 DMRTA1Q5VZB9 504 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 VAMP8Q9BV40 100 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 PCED1AQ9H1Q7 454 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 KCNIP2Q9NS61 270 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 DLL3Q9NYJ7 618 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 KCNS2Q9ULS6 477 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 RBM7Q9Y580 266 aaKnown RBP13.71□□□□□ -0.21
UPK3B-202ENST00000334348 MUC6Q6W4X9 2439 aa13.71□□□□□ -0.21
UPK3B-202ENST00000334348 F6UZH7 168 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 NDUFB4O95168 129 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 EGR1P18146 543 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 CDC34P49427 236 aaPredicted RBP13.71□□□□□ -0.22
UPK3B-202ENST00000334348 LHX2P50458 406 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 LINC00310P59036 64 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 VWC2Q2TAL6 325 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 MYPOPQ86VE0 399 aaPredicted RBP13.71□□□□□ -0.22
UPK3B-202ENST00000334348 PRR18Q8N4B5 295 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 CHODLQ9H9P2 273 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 SH2D2AQ9NP31 389 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 PAM16Q9Y3D7 125 aa13.71□□□□□ -0.22
UPK3B-202ENST00000334348 WDFY3Q8IZQ1 3526 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 KRASP01116 189 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 CRYAAP02489 173 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 B3GALT5-AS1P59052 145 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 COL5A1-AS1Q5SY13 56 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 MRPL21Q7Z2W9 205 aaKnown RBP13.7□□□□□ -0.22
UPK3B-202ENST00000334348 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 OR1L1Q8NH94 360 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 EML6Q6ZMW3 1958 aa13.7□□□□□ -0.22
UPK3B-202ENST00000334348 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
UPK3B-202ENST00000334348 C17orf112F2Z3M2 114 aa13.69□□□□□ -0.22
UPK3B-202ENST00000334348 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPK3B-202ENST00000334348 WDR1O75083 606 aa13.69□□□□□ -0.22
UPK3B-202ENST00000334348 SYNGR4O95473 234 aa13.69□□□□□ -0.22
UPK3B-202ENST00000334348 CYC1P08574 325 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms