RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 ZNF788Q6ZQV5 615 aa16.85■□□□□ 0.29
RIPPLY3-201ENST00000329553 OR4D5Q8NGN0 318 aa16.85■□□□□ 0.29
RIPPLY3-201ENST00000329553 FBXO9Q9UK97 447 aaPredicted RBP16.85■□□□□ 0.29
RIPPLY3-201ENST00000329553 ST8SIA3O43173 380 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 ZG16O60844 167 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 GZMHP20718 246 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 ZNF672Q499Z4 452 aaPredicted RBP16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 DMBX1Q8NFW5 382 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 OR5D13Q8NGL4 314 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 CCL17Q92583 94 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 TOLLIPQ9H0E2 274 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 ZNF665Q9H7R5 613 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 ARID1AO14497 2285 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 CR1LQ2VPA4 569 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 TRAT1Q6PIZ9 186 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 COMMD1Q8N668 190 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 SLC35G3Q8N808 338 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 TMEM56Q96MV1 263 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 TMEM56-RWDD3S4R434 201 aa16.84■□□□□ 0.29
RIPPLY3-201ENST00000329553 TMEM178BH3BS89 294 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 F2RP25116 425 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPP1CCP36873 323 aaKnown RBP16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 SNCAP37840 140 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 RAB13P51153 203 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 MUC15Q8N387 334 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 FAM216BQ8N7L0 139 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 TMEM204Q9BSN7 226 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 SCRT1Q9BWW7 348 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 CACFD1Q9UGQ2 172 aa16.83■□□□□ 0.28
RIPPLY3-201ENST00000329553 IGHV3-43A0A0B4J1X8 118 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 SPINT2O43291 252 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 CDS2O95674 445 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 IGHV3-43DP0DP04 118 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 UCP1P25874 307 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 S100GP29377 79 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 IQCF2Q8IXL9 164 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 SELENOHQ8IZQ5 122 aaKnown RBP16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 RXFP4Q8TDU9 374 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 AKR1E2Q96JD6 320 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 RNF150Q9ULK6 438 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 KCNS2Q9ULS6 477 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 ABCA4P78363 2273 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 TSPAN15O95858 294 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 SRPXP78539 464 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 MIDNQ504T8 468 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 ZNF695Q8IW36 515 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 DRAM1Q8N682 238 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 OR51H1Q8NH63 302 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 NINJ1Q92982 152 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 C11orf1Q9H5F2 150 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 TMEM106BQ9NUM4 274 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 RCL1Q9Y2P8 373 aaKnown RBP16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 KPTNQ9Y664 436 aa16.82■□□□□ 0.28
RIPPLY3-201ENST00000329553 H0Y980 276 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PEA15Q15121 130 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 LTC4SQ16873 150 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 C1orf87Q8N0U7 546 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 ITLN2Q8WWU7 325 aaPredicted RBP16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPIAL4EA0A075B759 164 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 TRAV38-1A0A0B4J264 116 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 COLCA2A8K830 154 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPIAL4DF5H284 164 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 CLDN14O95500 239 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 CRYBA1P05813 215 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPIAL4FP0DN26 164 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PAX6P26367 422 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 HOXA1P49639 335 aaPredicted RBP16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 RAB5CP51148 216 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 HTD2P86397 168 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 NHLH2Q02577 135 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 C14orf79Q96F83 325 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 NCOR1P1Q9H4R4 102 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPIAL4AQ9Y536 164 aa16.81■□□□□ 0.28
RIPPLY3-201ENST00000329553 CGB3P0DN86 165 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 CGB7P0DN87 165 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 AVPI1Q5T686 147 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 FGFRL1Q8N441 504 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 FAM234AQ9H0X4 552 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 OR6C3Q9NZP0 311 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 SPTBN1Q01082 2364 aaKnown RBP16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 DSCAML1Q8TD84 2053 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 TMPRSS2O15393 492 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 ZNF808Q8N4W9 903 aaPredicted RBP16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 OR2D2Q9H210 308 aa16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 STRAPQ9Y3F4 350 aaKnown RBP16.8■□□□□ 0.28
RIPPLY3-201ENST00000329553 ZNF645Q8N7E2 425 aa16.79■□□□□ 0.28
RIPPLY3-201ENST00000329553 SH3BGRL3Q9H299 93 aa16.79■□□□□ 0.28
RIPPLY3-201ENST00000329553 SMCO4Q9NRQ5 59 aa16.79■□□□□ 0.28
RIPPLY3-201ENST00000329553 C19orf12Q9NSK7 152 aa16.79■□□□□ 0.28
RIPPLY3-201ENST00000329553 WNT2P09544 360 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 OMGP23515 440 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 CAMLGP49069 296 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 FHITP49789 147 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 PPT1P50897 306 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 ZNF616Q08AN1 781 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 GUK1Q16774 197 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 C5orf30Q96GV9 206 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 FOLR2P14207 255 aa16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 EWSR1Q01844 656 aaKnown RBP eCLIP16.78■□□□□ 0.28
RIPPLY3-201ENST00000329553 C17orf58Q2M2W7 97 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms