RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 OR4F5Q8NH21 305 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 OR4F4Q96R69 305 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 HIST1H2BLQ99880 126 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 VAX2Q9UIW0 290 aa16.73■□□□□ 0.27
CRLF3-201ENST00000324238 A0A1W2PPQ1 181 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 PHOX2AO14813 284 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 RNF224P0DH78 156 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 HBG1P69891 147 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 HBG2P69892 147 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 AESQ08117 197 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 P2RY6Q15077 328 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 C5orf30Q96GV9 206 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 ZG16O60844 167 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 HOXA6P31267 233 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 COL10A1Q03692 680 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 GCSAMLQ5JQS6 135 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 RNFT1Q5M7Z0 435 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 FIP1L1Q6UN15 594 aaKnown RBP16.72■□□□□ 0.27
CRLF3-201ENST00000324238 TMEM37Q8WXS4 190 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 PCGF1Q9BSM1 259 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 RIMS4Q9H426 269 aaPredicted RBP16.72■□□□□ 0.27
CRLF3-201ENST00000324238 GFOD1Q9NXC2 390 aa16.72■□□□□ 0.27
CRLF3-201ENST00000324238 TRAV1-1A0A0B4J248 108 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 A0A1B0GV90 55 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 CRYAAP02489 173 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 ACP1P24666 158 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 TMEM41BQ5BJD5 291 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 NCR3LG1Q68D85 454 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 LYZL6O75951 148 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 S1PR2O95136 353 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 ARR3P36575 388 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 RNPS1Q15287 305 aaKnown RBP16.71■□□□□ 0.27
CRLF3-201ENST00000324238 SRSF7Q16629 238 aaKnown RBP eCLIP16.71■□□□□ 0.27
CRLF3-201ENST00000324238 ZNF600Q6ZNG1 722 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 MBD3L1Q8WWY6 194 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 C14orf144Q96I85 54 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 DCTN5Q9BTE1 182 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 LINC00470Q9BZP3 86 aa16.71■□□□□ 0.27
CRLF3-201ENST00000324238 SS18L1O75177 396 aaPredicted RBP16.71■□□□□ 0.26
CRLF3-201ENST00000324238 TNFSF15O95150 251 aa16.71■□□□□ 0.26
CRLF3-201ENST00000324238 HIST1H1BP16401 226 aaKnown RBP16.71■□□□□ 0.26
CRLF3-201ENST00000324238 UBE2G2P60604 165 aa16.71■□□□□ 0.26
CRLF3-201ENST00000324238 SRSF6Q13247 344 aaKnown RBP16.71■□□□□ 0.26
CRLF3-201ENST00000324238 TMEM204Q9BSN7 226 aa16.71■□□□□ 0.26
CRLF3-201ENST00000324238 ATMQ13315 3056 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 C17orf98A8MV24 154 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 PTBP3O95758 552 aaKnown RBP16.7■□□□□ 0.26
CRLF3-201ENST00000324238 TMEM164Q5U3C3 297 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 MRGPRGQ86SM5 289 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 OR51G1Q8NGK1 321 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 FAM234AQ9H0X4 552 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 C1QTNF9BB2RNN3 333 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 J3QT63 122 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 MEF2BQ02080 365 aaPredicted RBP16.7■□□□□ 0.26
CRLF3-201ENST00000324238 ZNF497Q6ZNH5 498 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 MRGPRDQ8TDS7 321 aa16.7■□□□□ 0.26
CRLF3-201ENST00000324238 PGPEP1LA6NFU8 196 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.69■□□□□ 0.26
CRLF3-201ENST00000324238 IL2RGP31785 369 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 TNFRSF9Q07011 255 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 DPPA3Q6W0C5 159 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 MPC1Q9Y5U8 109 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 TNRC6AQ8NDV7 1962 aaKnown RBP16.69■□□□□ 0.26
CRLF3-201ENST00000324238 OR5B21A6NL26 309 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 PAGE4O60829 102 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 FGF7P21781 194 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 CHRNA7P36544 502 aa16.69■□□□□ 0.26
CRLF3-201ENST00000324238 ZNF705GA8MUZ8 300 aaPredicted RBP16.68■□□□□ 0.26
CRLF3-201ENST00000324238 FAM3BP58499 235 aaPredicted RBP16.68■□□□□ 0.26
CRLF3-201ENST00000324238 RPL23P62829 140 aaKnown RBP16.68■□□□□ 0.26
CRLF3-201ENST00000324238 TMEM241Q24JQ0 296 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 SSX9Q7RTT3 188 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 OR10A7Q8NGE5 316 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 LSM10Q969L4 123 aaKnown RBP16.68■□□□□ 0.26
CRLF3-201ENST00000324238 PARLQ9H300 379 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 LIN7CQ9NUP9 197 aaKnown RBP16.68■□□□□ 0.26
CRLF3-201ENST00000324238 TMEM265A0A087WTH1 108 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 ODAMA1E959 279 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 BSXQ3C1V8 233 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 FFAR4Q5NUL3 377 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 ZNF66Q6ZN08 573 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 Q6ZR03 302 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 OR10G4Q8NGN3 311 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 OR10G9Q8NGN4 311 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 OR10G7Q8NGN6 311 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 METRNQ9UJH8 293 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 PIEZO2Q9H5I5 2752 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 A0A1B0GUS0 222 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 SMCO3A2RU48 225 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 HNF1AP20823 631 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 RND2P52198 227 aa16.68■□□□□ 0.26
CRLF3-201ENST00000324238 B4DEV8 164 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 C12orf77C9JDV5 145 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 AGFG2O95081 481 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 SSTR5P35346 364 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 BRWD1-AS2P59051 145 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 SLC10A1Q14973 349 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 NRN1LQ496H8 165 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 SLC25A40Q8TBP6 338 aa16.67■□□□□ 0.26
CRLF3-201ENST00000324238 ABI3Q9P2A4 366 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms