RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SPRNQ5BIV9 151 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 MOGAT3Q86VF5 341 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 LEAP2Q969E1 77 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 RBKSQ9H477 322 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 BIN3Q9NQY0 253 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 A0A1W2PPE3 182 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF891A8MT65 544 aaPredicted RBP9.67□□□□□ -0.86
PTPN2-201ENST00000309660 AHRRA9YTQ3 701 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 NPIPB11E5RHQ5 1161 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 H3BQ15 152 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 K7EM74 188 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 SPINT2O43291 252 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 CRYAAP02489 173 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 TAGLN2P37802 199 aaKnown RBP9.67□□□□□ -0.86
PTPN2-201ENST00000309660 CHD3Q12873 2000 aaKnown RBP9.67□□□□□ -0.86
PTPN2-201ENST00000309660 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF787Q6DD87 383 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 HAPLN4Q86UW8 402 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 CD177Q8N6Q3 437 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 C5orf30Q96GV9 206 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 OR2V2Q96R30 315 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 PLSCR4Q9NRQ2 329 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 KIAA1456Q9P272 454 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF318Q5VUA4 2279 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 DMXL2Q8TDJ6 3036 aa9.67□□□□□ -0.86
PTPN2-201ENST00000309660 ODAMA1E959 279 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 ZG16O60844 167 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 SELLP14151 372 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 GUSBP1Q15486 140 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 MSMO1Q15800 293 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 SEM1Q6ZVN7 128 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 ZGRF1Q86YA3 2104 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF525Q8N782 197 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 OR2C1O95371 312 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 TNFRSF9Q07011 255 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 SLC35E4Q6ICL7 350 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 ZNF429Q86V71 674 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 VKORC1L1Q8N0U8 176 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 MUCL1Q96DR8 90 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 ADGRG4Q8IZF6 3080 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 PIGBOS1A0A0B4J2F0 54 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 FCGR3BO75015 233 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 SCAF4O95104 1147 aaKnown RBP9.66□□□□□ -0.86
PTPN2-201ENST00000309660 IFNA17P01571 189 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 C15orf54Q8N8G6 183 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 HES4Q9HCC6 221 aa9.66□□□□□ -0.86
PTPN2-201ENST00000309660 LINC00473A8K010 186 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 DEFA4P12838 97 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 PTAFRP25105 342 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 GPR12P47775 334 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 IGFL2Q6UWQ7 119 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 RAB39BQ96DA2 213 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 HBE1P02100 147 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 ICAM4Q14773 271 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 P2RY6Q15077 328 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 C1orf162Q8NEQ5 155 aaPredicted RBP9.65□□□□□ -0.86
PTPN2-201ENST00000309660 NIPSNAP3BQ9BS92 247 aa9.65□□□□□ -0.86
PTPN2-201ENST00000309660 SRP19P09132 144 aaKnown RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 HOXB1P14653 301 aaPredicted RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 CD200P41217 278 aa9.65□□□□□ -0.87
PTPN2-201ENST00000309660 RPS10P46783 165 aaKnown RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 FAM27E3Q08E93 113 aa9.65□□□□□ -0.87
PTPN2-201ENST00000309660 HABP2Q14520 560 aaPredicted RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF343Q6P1L6 599 aa9.65□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF474Q6S9Z5 364 aaPredicted RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 SLC25A22Q9H936 323 aa9.65□□□□□ -0.87
PTPN2-201ENST00000309660 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.65□□□□□ -0.87
PTPN2-201ENST00000309660 WASF3Q9UPY6 502 aa9.65□□□□□ -0.87
PTPN2-201ENST00000309660 SMCO3A2RU48 225 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 M0R1X1 148 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 MT-ND4LP03901 98 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 SLC25A6P12236 298 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 KITLGP21583 273 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 DLK1P80370 383 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF674Q2M3X9 581 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 SSX7Q7RTT5 188 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 LINC00518Q8N0U6 118 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 CLDND2Q8NHS1 167 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 ITLN1Q8WWA0 313 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 UNKLQ9H9P5 680 aaKnown RBP9.64□□□□□ -0.87
PTPN2-201ENST00000309660 SLC25A15Q9Y619 301 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 BTBD17A6NE02 478 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 LMO1P25800 156 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 KLF3P57682 345 aaPredicted RBP9.64□□□□□ -0.87
PTPN2-201ENST00000309660 RPL39P5Q59GN2 51 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
PTPN2-201ENST00000309660 RCC1LQ96I51 464 aaKnown RBP9.64□□□□□ -0.87
PTPN2-201ENST00000309660 IGKV1D-17A0A075B6S4 117 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 LRRC30A6NM36 301 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 RAB5AP20339 215 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 RPS23P62266 143 aaKnown RBP9.63□□□□□ -0.87
PTPN2-201ENST00000309660 RHEBQ15382 184 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 LHX4Q969G2 390 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 C12orf57Q99622 126 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 SLC39A9Q9NUM3 307 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 MAP1LC3B2A6NCE7 125 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 MARCH11A6NNE9 402 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 IGLV1-44P01699 117 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms