RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 CYYR1Q96J86 154 aa9.98□□□□□ -0.81
TGFB1-204ENST00000600196 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
TGFB1-204ENST00000600196 FAM172BPA6NC97 362 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 MEIS3P1A6NDR6 274 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 CRLF1O75462 422 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 UPK1BO75841 260 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 PMP2P02689 132 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 FAM157CP0CG43 387 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 S100GP29377 79 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 MC5RP33032 325 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 RFX2P48378 723 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 HERV-K104P61576 105 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 HABP2Q14520 560 aaPredicted RBP9.97□□□□□ -0.81
TGFB1-204ENST00000600196 BAK1Q16611 211 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF833PQ6ZTB9 187 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 LDLRAD3Q86YD5 345 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 TMEM86BQ8N661 226 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 ZNF645Q8N7E2 425 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 TCTEX1D1Q8N7M0 179 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 ZFAND1Q8TCF1 268 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 RPEQ96AT9 228 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 RNF5Q99942 180 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 IFI27L2Q9H2X8 130 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 FAM212BQ9NTI7 297 aaPredicted RBP9.97□□□□□ -0.81
TGFB1-204ENST00000600196 OR1A1Q9P1Q5 309 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 FAM96BQ9Y3D0 163 aa9.97□□□□□ -0.81
TGFB1-204ENST00000600196 VPS13CQ709C8 3753 aa9.96□□□□□ -0.81
TGFB1-204ENST00000600196 IGHV3-43A0A0B4J1X8 118 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 MEX3AA1L020 520 aaKnown RBP9.96□□□□□ -0.82
TGFB1-204ENST00000600196 B3GALNT1O75752 331 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF735P0CB33 412 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 IGHV3-43DP0DP04 118 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 IGHV4-38-2P0DP08 117 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 SRD5A1P18405 259 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 COX7A1P24310 79 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 BRS3P32247 399 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 SAA4P35542 130 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 LTC4SQ16873 150 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF66Q6ZN08 573 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 CMTM1Q8IZ96 169 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 SLC38A6Q8IZM9 456 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 PIP4P2Q8N4L2 257 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 JMJD8Q96S16 334 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 HSD17B10Q99714 261 aaKnown RBP9.96□□□□□ -0.82
TGFB1-204ENST00000600196 SMR3AQ99954 134 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF2Q9BSG1 426 aaPredicted RBP9.96□□□□□ -0.82
TGFB1-204ENST00000600196 HRASLSQ9HDD0 168 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 COPZ2Q9P299 210 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 RBM7Q9Y580 266 aaKnown RBP9.96□□□□□ -0.82
TGFB1-204ENST00000600196 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.82
TGFB1-204ENST00000600196 PIGBOS1A0A0B4J2F0 54 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 AMY2AP04746 511 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 OR8U9P0C7N5 309 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 RRASP10301 218 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 NFYAP23511 347 aaPredicted RBP9.95□□□□□ -0.82
TGFB1-204ENST00000600196 CD1BP29016 333 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 GPR12P47775 334 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 DEFA1P59665 94 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 DEFA3P59666 94 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 GNMTQ14749 295 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF57Q68EA5 555 aaPredicted RBP9.95□□□□□ -0.82
TGFB1-204ENST00000600196 MZT2BQ6NZ67 158 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 LIAT1Q6ZQX7 453 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 ODF3L1Q8IXM7 274 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 LYG1Q8N1E2 194 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 BVESQ8NE79 360 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 OR4C16Q8NGL9 310 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 OR8U1Q8NH10 309 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 OR5R1Q8NH85 324 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 UBALD1Q8TB05 177 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 AJUBAQ96IF1 538 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 SLC6A7Q99884 636 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF251Q9BRH9 671 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 TINAGL1Q9GZM7 467 aaPredicted RBP9.95□□□□□ -0.82
TGFB1-204ENST00000600196 DPAGT1Q9H3H5 408 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 POMT1Q9Y6A1 747 aa9.95□□□□□ -0.82
TGFB1-204ENST00000600196 FAM90A9PA6NNJ1 464 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RNF212BA8MTL3 300 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 CLDN34H7C241 214 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 HSD17B6O14756 317 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 ST8SIA5O15466 376 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 AADACP22760 399 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 THBS3P49746 956 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 GNG10P50151 68 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RPL15P61313 204 aaKnown RBP9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RND3P61587 244 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 KLRD1Q13241 179 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 ASAH1Q13510 395 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 EBI3Q14213 229 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 AADACL3Q5VUY0 350 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 C11orf88Q6PI97 169 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RBMS3Q6XE24 437 aaKnown RBP9.94□□□□□ -0.82
TGFB1-204ENST00000600196 Q6YL49 198 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 KCTD9Q7L273 389 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 ZDHHC22Q8N966 263 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 CD300LFQ8TDQ1 290 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF418Q8TF45 676 aaPredicted RBP9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RTN4IP1Q8WWV3 396 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms