RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LMO1P25800 156 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 CHRNB4P30926 498 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 IDH3GP51553 393 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 DVL1P1P54792 670 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 TAS2R30P59541 319 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 PAX5Q02548 391 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 PEA15Q15121 130 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TSC22D1Q15714 1073 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 MST1LQ2TV78 715 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 ZNF718Q3SXZ3 478 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 NMSQ5H8A3 153 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TRAT1Q6PIZ9 186 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 ZNF474Q6S9Z5 364 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 BTNL8Q6UX41 500 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 DPPA3Q6W0C5 159 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 MEX3BQ6ZN04 569 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 Q6ZPA2 131 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 ZNF818PQ6ZRF7 136 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 FAM90A1Q86YD7 464 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR2C3Q8N628 320 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SCCPDHQ8NBX0 429 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 DMBX1Q8NFW5 382 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR8G5Q8NG78 346 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR10V1Q8NGI7 309 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR1J1Q8NGS3 322 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR11L1Q8NGX0 322 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SLC25A40Q8TBP6 338 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 RAB40CQ96S21 281 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TSNAXQ99598 290 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 PBDC1Q9BVG4 233 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 C1QTNF6Q9BXI9 259 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OR2J1Q9GZK6 312 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TLNRD1Q9H1K6 362 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 OPN3Q9H1Y3 402 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 HES4Q9HCC6 221 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 TREM1Q9NP99 234 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 LYRM2Q9NU23 88 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 LIN7CQ9NUP9 197 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 UQCC1Q9NVA1 299 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 Q9UFV3 132 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 PURGQ9UJV8 347 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 TRAPPC2LQ9UL33 140 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 SLC25A15Q9Y619 301 aa4.83□□□□□ -1.64
SDF2-206ENST00000587788 RP1L1Q8IWN7 2480 aaPredicted RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 ASH1LQ9NR48 2969 aaKnown RBP4.83□□□□□ -1.64
SDF2-206ENST00000587788 CACNA1DQ01668 2161 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 NBPF19A0A087WUL8 3843 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 IGKV1-6A0A0C4DH72 117 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 LOC105371267A0A1B0GV96 52 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 FAM90A26D6RGX4 464 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 RNASEK-C17orf49H0YIS7 233 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 WRBO00258 174 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 SLC33A1O00400 549 aaPredicted RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 ABCD4O14678 606 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HSD17B6O14756 317 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 TSPAN4O14817 238 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 ADAM20O43506 726 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 LY86O95711 162 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 OR2H2O95918 312 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HAND1O96004 215 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 CRYAAP02489 173 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 CD5P06127 495 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HEXAP06865 529 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 PTAFRP25105 342 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 GCH1P30793 250 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 LPAR6P43657 344 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 SELENOVP59797 346 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 RAB2AP61019 212 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 RPL23AP62750 156 aaKnown RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 SRSF3P84103 164 aaKnown RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 EWSR1Q01844 656 aaKnown RBP eCLIP4.82□□□□□ -1.64
SDF2-206ENST00000587788 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 PSG7Q13046 419 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 ODF1Q14990 250 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HERPUD1Q15011 391 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 FBXL19-AS1Q494R0 122 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 MIDNQ504T8 468 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 MBNL2Q5VZF2 373 aaKnown RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 SLC35E4Q6ICL7 350 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 STX12Q86Y82 276 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 FAM219AQ8IW50 185 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 ZNF808Q8N4W9 903 aaPredicted RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 OR52M1Q8NGK5 317 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 OR10Z1Q8NGY1 313 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 KLF14Q8TD94 323 aaPredicted RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 RDH5Q92781 318 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 GALMQ96C23 342 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 CYYR1Q96J86 154 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 TOLLIPQ9H0E2 274 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HIPK2Q9H2X6 1198 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 HRH4Q9H3N8 390 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 UNKLQ9H9P5 680 aaKnown RBP4.82□□□□□ -1.64
SDF2-206ENST00000587788 RAB9BQ9NP90 201 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 KCNJ16Q9NPI9 418 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 CCL28Q9NRJ3 127 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 COA4Q9NYJ1 87 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 CACFD1Q9UGQ2 172 aa4.82□□□□□ -1.64
SDF2-206ENST00000587788 RCL1Q9Y2P8 373 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms