RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 OR4A16Q8NH70 328 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 NEIL1Q96FI4 390 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 ABHD14BQ96IU4 210 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 IMMP2LQ96T52 175 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 SPTAN1Q13813 2472 aaKnown RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 EYSQ5T1H1 3165 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 NPIPB13A6NJU9 1138 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 NPIPB4C9JG80 1138 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 SYNGR3O43761 229 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 CDC34P49427 236 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 KIAA1644Q3SXP7 199 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 TCF23Q7RTU1 214 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 DMRTC2Q8IXT2 367 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 TAF15Q92804 592 aaKnown RBP eCLIP9.04□□□□□ -0.964e-7■■■■□ 23.8
RNF43-207ENST00000583753 ZDHHC16Q969W1 377 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 APOBEC3DQ96AK3 386 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 TMEM9BQ9NQ34 198 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 BOKQ9UMX3 212 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 GTF3C1Q12789 2109 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 GNG3P63215 75 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 HOXA4Q00056 320 aaPredicted RBP9.04□□□□□ -0.96
RNF43-207ENST00000583753 ZNF826PQ6ZT77 177 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 SMRP1Q8NCR6 262 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 RAB24Q969Q5 203 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 NABP1Q96AH0 204 aa9.04□□□□□ -0.96
RNF43-207ENST00000583753 LRP5LA4QPB2 252 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 CEACAM18A8MTB9 384 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 B4DEV8 164 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 C17orf112F2Z3M2 114 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 FCGR3BO75015 233 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 PTGDSP41222 190 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 LINC00205P59089 165 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 CACNA1BQ00975 2339 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 AESQ08117 197 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 MRPL49Q13405 166 aaKnown RBP9.03□□□□□ -0.96
RNF43-207ENST00000583753 Q6ZRM9 215 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 NUFIP2Q7Z417 695 aaKnown RBP9.03□□□□□ -0.96
RNF43-207ENST00000583753 FGFRL1Q8N441 504 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 DEFB108BQ8NET1 73 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 OR52L2PQ8NGH6 319 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 A6NNC1 897 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 M0R143 59 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 ZG16O60844 167 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 AMBPP02760 352 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 ERVK-16P61578 105 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 WDR74Q6RFH5 385 aaPredicted RBP9.03□□□□□ -0.96
RNF43-207ENST00000583753 ZIC4Q8N9L1 334 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 SDF2L1Q9HCN8 221 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 ATP23Q9Y6H3 246 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 FAM157AC9JC47 383 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 CELA3AP09093 270 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 PCP4P48539 62 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 TFF3Q07654 80 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 ARL16Q0P5N6 197 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 RNF151Q2KHN1 245 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 PRR31Q5SQ13 230 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 FAM53AQ6NSI3 398 aaPredicted RBP9.03□□□□□ -0.96
RNF43-207ENST00000583753 EGLN1Q9GZT9 426 aa9.03□□□□□ -0.96
RNF43-207ENST00000583753 IFITM10A6NMD0 228 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 A8MXE2 369 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 FCN1O00602 326 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 PPIHO43447 177 aaKnown RBP9.02□□□□□ -0.96
RNF43-207ENST00000583753 OR4A8P0C604 315 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 ERVFC1-1P60608 527 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 FGF12P61328 243 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 GCSAMLQ5JQS6 135 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 OR1L1Q8NH94 360 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 DTD1Q8TEA8 209 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 C10orf35Q96D05 121 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 SMDT1Q9H4I9 107 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 DLL3Q9NYJ7 618 aa9.02□□□□□ -0.96
RNF43-207ENST00000583753 C2orf16Q68DN1 1984 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 A0A1B0GU03 582 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 RNF212BA8MTL3 300 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 H0Y980 276 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 SH2D1BO14796 132 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 TIMM8AO60220 97 aaPredicted RBP9.02□□□□□ -0.97
RNF43-207ENST00000583753 LYZL6O75951 148 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 IER3P46695 156 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 CNN1P51911 297 aaKnown RBP9.02□□□□□ -0.97
RNF43-207ENST00000583753 ACOT6Q3I5F7 207 aaPredicted RBP9.02□□□□□ -0.97
RNF43-207ENST00000583753 C10orf128Q5T292 105 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 PRR27Q6MZM9 219 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 TMEM183AQ8IXX5 376 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 VKORC1L1Q8N0U8 176 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 CMTM2Q8TAZ6 248 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 GALMQ96C23 342 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 APC2O95996 2303 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 UCP1P25874 307 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 FOXO1Q12778 655 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 OR5I1Q13606 314 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 PCOLCEQ15113 449 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 C20orf204Q6ZNR8 217 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 ZNF664Q8N3J9 261 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 TMEM54Q969K7 222 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 UHRF2Q96PU4 802 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 CISD1Q9NZ45 108 aaKnown RBP9.02□□□□□ -0.97
RNF43-207ENST00000583753 CRIM1Q9NZV1 1036 aa9.02□□□□□ -0.97
RNF43-207ENST00000583753 GALR2O43603 387 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms