RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 GFOD1Q9NXC2 390 aa24.1■■□□□ 1.45
CTDNEP1-208ENST00000573600 ADGRG4Q8IZF6 3080 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 ST8SIA5O15466 376 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 SCGB1D2O95969 90 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 ZNF16P17020 682 aaPredicted RBP24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 THOC7Q6I9Y2 204 aaKnown RBP24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 ZNF66Q6ZN08 573 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 OR52M1Q8NGK5 317 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 IDI2-AS1Q9NZ38 188 aa24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 LSM5Q9Y4Y9 91 aaKnown RBP24.09■■□□□ 1.45
CTDNEP1-208ENST00000573600 BCL2L11O43521 198 aa24.08■■□□□ 1.45
CTDNEP1-208ENST00000573600 MBPP02686 304 aaPredicted RBP24.08■■□□□ 1.45
CTDNEP1-208ENST00000573600 FOXRED2Q8IWF2 684 aa24.08■■□□□ 1.45
CTDNEP1-208ENST00000573600 FAM212BQ9NTI7 297 aaPredicted RBP24.08■■□□□ 1.45
CTDNEP1-208ENST00000573600 SDHAF2Q9NX18 166 aa24.08■■□□□ 1.45
CTDNEP1-208ENST00000573600 ATP6V1G1O75348 118 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 OMGP23515 440 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 COL8A2P25067 703 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 RAB7AP51149 207 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 EXOSC2Q13868 293 aaKnown RBP24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 LYPD2Q6UXB3 125 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 DTX2Q86UW9 622 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 OR10A7Q8NGE5 316 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 LSM10Q969L4 123 aaKnown RBP24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 C5orf30Q96GV9 206 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 AQP10Q96PS8 301 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 HSD17B10Q99714 261 aaKnown RBP24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 UBQLN2Q9UHD9 624 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 K7EPK0 472 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 ST8SIA3O43173 380 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 SLC25A6P12236 298 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 IGFBP2P18065 325 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 GPR12P47775 334 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 RPL31P62899 125 aaKnown RBP24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 FAM71E2Q8N5Q1 922 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 NEU4Q8WWR8 484 aaPredicted RBP24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 ABHD14BQ96IU4 210 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 GAL3ST2Q9H3Q3 398 aa24.07■■□□□ 1.44
CTDNEP1-208ENST00000573600 DANCRP0C864 163 aa24.06■■□□□ 1.44
CTDNEP1-208ENST00000573600 ZNF585BQ52M93 769 aa24.06■■□□□ 1.44
CTDNEP1-208ENST00000573600 FGFRL1Q8N441 504 aa24.06■■□□□ 1.44
CTDNEP1-208ENST00000573600 RRNAD1Q96FB5 475 aaKnown RBP24.06■■□□□ 1.44
CTDNEP1-208ENST00000573600 B8ZZF3 427 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 E5RGE8 158 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 C19orf84I3L1E1 186 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 MRPS11P82912 194 aaKnown RBP24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 ARPC5LQ9BPX5 153 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 GAB2Q9UQC2 676 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 NSG2Q9Y328 171 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 POMT1Q9Y6A1 747 aa24.05■■□□□ 1.44
CTDNEP1-208ENST00000573600 CLDN1O95832 211 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 CFDP00746 253 aaPredicted RBP24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 SOD3P08294 240 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 UBA52P62987 128 aaKnown RBP24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 C19orf12Q9NSK7 152 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 CTSZQ9UBR2 303 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 A0A1B0GU03 582 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 DVL1O14640 695 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 IGKV1-39P01597 117 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 IGKV1D-39P04432 117 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 HTR2BP41595 481 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 NKX2-1P43699 371 aaPredicted RBP24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 Q3ZCU0 254 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 FAM219AQ8IW50 185 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 RNASE11Q8TAA1 199 aaKnown RBP24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 TCTEX1D2Q8WW35 142 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 ABHD14AQ9BUJ0 271 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 PLEKHA2Q9HB19 425 aa24.04■■□□□ 1.44
CTDNEP1-208ENST00000573600 RPL30P62888 115 aaKnown RBP24.03■■□□□ 1.44
CTDNEP1-208ENST00000573600 LYNX1G3V0Z9 82 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 KCNAB3O43448 404 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 FCN3O75636 299 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 IGHV2-70P01814 119 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 LYNX1P0DP58 116 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 LPAR6P43657 344 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 BTNL3Q6UXE8 466 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 H1FXQ92522 213 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 ZNF714Q96N38 554 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 IFI27L2Q9H2X8 130 aa24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 RPUSD1Q9UJJ7 312 aaKnown RBP24.02■■□□□ 1.44
CTDNEP1-208ENST00000573600 ATG12O94817 140 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF134P52741 427 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 AKR1C2P52895 323 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF273Q14593 569 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF436-AS1Q8NC38 126 aaPredicted RBP24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 GPR146Q96CH1 333 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 RELNP78509 3460 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 MSGN1A6NI15 193 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 HKR1P10072 659 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 NFYBP25208 207 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 OR8H3Q8N146 312 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 CD300LFQ8TDQ1 290 aa24.01■■□□□ 1.43
CTDNEP1-208ENST00000573600 RPL12P30050 165 aaKnown RBP24■■□□□ 1.43
CTDNEP1-208ENST00000573600 TMEM200BQ69YZ2 307 aa24■■□□□ 1.43
CTDNEP1-208ENST00000573600 SPAG16Q8N0X2 631 aa24■■□□□ 1.43
CTDNEP1-208ENST00000573600 ZNF471Q9BX82 626 aaPredicted RBP24■■□□□ 1.43
CTDNEP1-208ENST00000573600 RCL1Q9Y2P8 373 aaKnown RBP24■■□□□ 1.43
CTDNEP1-208ENST00000573600 F5H0A9 414 aaPredicted RBP23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 GOSR1O95249 250 aa23.99■■□□□ 1.43
CTDNEP1-208ENST00000573600 DAOP14920 347 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms