RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 ADIPOR1Q96A54 375 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 REEP6Q96HR9 211 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 RCC1LQ96I51 464 aaKnown RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 OXGR1Q96P68 337 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 B3GAT1Q9P2W7 334 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 FAM24AA6NFZ4 105 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 CLDN34H7C241 214 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PHF1O43189 567 aaPredicted RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 NUPR1O60356 82 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 SMPD2O60906 423 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 NRASP01111 189 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 HBE1P02100 147 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 COX7A1P24310 79 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 CEACAM6P40199 344 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 ZNF133P52736 654 aaPredicted RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 RPL23AP62750 156 aaKnown RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 H3F3AP84243 136 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 KISS1Q15726 138 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 DCAF10Q5QP82 559 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 OR8G2PQ6IF36 304 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C6orf201Q7Z4U5 140 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C20orf196Q8IYI0 205 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 OR2C3Q8N628 320 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 LRTM2Q8N967 370 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 RBMXL1Q96E39 390 aaKnown RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 BOD1Q96IK1 185 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C18orf12Q96KH6 178 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TPPP3Q9BW30 176 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TM2D1Q9BX74 207 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 NECAP2Q9NVZ3 263 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 ANXA10Q9UJ72 324 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PPP1R3CQ9UQK1 317 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 PCNX3Q9H6A9 2034 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 MTORP42345 2549 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 IGKV1-9A0A0C4DH69 117 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 LNP1A1A4G5 178 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 NPIPB13A6NJU9 1138 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 NPIPB4C9JG80 1138 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TSPAN2O60636 221 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 SP9P0CG40 484 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 CCL3P10147 92 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TDGF1P13385 188 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 DSCR4P56555 118 aaPredicted RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 SAPCD1Q5SSQ6 148 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TSPO2Q5TGU0 170 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 C1QL2Q7Z5L3 287 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TMEM183AQ8IXX5 376 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 FBXL14Q8N1E6 418 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 BEND2Q8NDZ0 799 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 SSC4DQ8WTU2 575 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 HAS2Q92819 552 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 HDHD3Q9BSH5 251 aaPredicted RBP4.51□□□□□ -1.69
PROM1-220ENST00000540805 RTL8AQ9BWD3 113 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 TP73-AS1Q9UF72 201 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 LHFPL6Q9Y693 200 aa4.51□□□□□ -1.69
PROM1-220ENST00000540805 SPRY1O43609 319 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 CCL1P22362 96 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 CA6P23280 308 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RPS16P62249 146 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 COL10A1Q03692 680 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 TLE4Q04727 773 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 CST9LP1Q5W188 147 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 LYG1Q8N1E2 194 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 CLDND2Q8NHS1 167 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 TMEM37Q8WXS4 190 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RND1Q92730 232 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 CLDN23Q96B33 292 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 UBTD1Q9HAC8 227 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 POLR3KQ9Y2Y1 108 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 TRAV34A0A0B4J273 112 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 LY6G6EA0A0G2JKS1 128 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 IGSF23A1L1A6 192 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 NCBP2LA6PVI3 153 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 DFFBO76075 338 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ZNF32P17041 273 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RAB4AP20338 218 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ALDH3B1P43353 468 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RND2P52198 227 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 PMS2P11Q13670 270 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 MSMO1Q15800 293 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 KCNMB1Q16558 191 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 OR4D5Q8NGN0 318 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 OR4A16Q8NH70 328 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RNASEH2CQ8TDP1 164 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 ZNF721Q8TF20 911 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ABHD3Q8WU67 409 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 GNPNAT1Q96EK6 184 aaPredicted RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 CHODLQ9H9P2 273 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 SLC2A9Q9NRM0 540 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ZNF319Q9P2F9 582 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 U3KQA8 63 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 ABCA12Q86UK0 2595 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 LOC102723971A0A1B0GUV8 181 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 OPN1MWP04001 364 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 IGKV3-11P04433 115 aa4.5□□□□□ -1.69
PROM1-220ENST00000540805 RPLP1P05386 114 aaKnown RBP4.5□□□□□ -1.69
PROM1-220ENST00000540805 OPN1MW2P0DN77 364 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms