RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 PAX5Q02548 391 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 RTP5Q14D33 572 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 TIPARPQ7Z3E1 657 aaKnown RBP12.67□□□□□ -0.38
TOP3B-206ENST00000436282 GPR35Q9HC97 309 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 OR4A8P0C604 315 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 B3GALT5-AS1P59052 145 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 SPANXN5Q5MJ07 72 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 MRPL41Q8IXM3 137 aaKnown RBP12.67□□□□□ -0.38
TOP3B-206ENST00000436282 MKXQ8IYA7 352 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 CISD2Q8N5K1 135 aaKnown RBP12.67□□□□□ -0.38
TOP3B-206ENST00000436282 OR10V1Q8NGI7 309 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 OR2T10Q8NGZ9 312 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 REPIN1Q9BWE0 567 aaKnown RBP12.67□□□□□ -0.38
TOP3B-206ENST00000436282 STRADBQ9C0K7 418 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 OR6C3Q9NZP0 311 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 LOXL2Q9Y4K0 774 aa12.67□□□□□ -0.38
TOP3B-206ENST00000436282 GDF1P27539 372 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 SRD5A2P31213 254 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 SRP14P37108 136 aaKnown RBP12.66□□□□□ -0.38
TOP3B-206ENST00000436282 TNFRSF9Q07011 255 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 SLC38A11Q08AI6 406 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 CLEC12BQ2HXU8 276 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 CEACAM21Q3KPI0 293 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.66□□□□□ -0.38
TOP3B-206ENST00000436282 ZDHHC23Q8IYP9 409 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 TMEM105Q8N8V8 129 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
TOP3B-206ENST00000436282 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 CT55Q8WUE5 264 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 DEPPQ9NTK1 212 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 CRIM1Q9NZV1 1036 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 LINC00596Q86U02 117 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 SNHG12Q9BXW3 62 aa12.66□□□□□ -0.38
TOP3B-206ENST00000436282 HNF4GQ14541 408 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 TESK1Q15569 626 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 GGNQ86UU5 652 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 OR1K1Q8NGR3 316 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 PSMF1Q92530 271 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 MANBALQ9NQG1 85 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 CTXND1A0A1B0GTU2 59 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 DEGS1O15121 323 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 GYPAP02724 150 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 SPINK14Q6IE38 97 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 GBGT1Q8N5D6 347 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 OR4F5Q8NH21 305 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 KCNE4Q8WWG9 221 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 OR4F4Q96R69 305 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 SLC25A22Q9H936 323 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 TMEM9BQ9NQ34 198 aa12.65□□□□□ -0.38
TOP3B-206ENST00000436282 PINLYPA6NC86 204 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 IGLV2-14P01704 120 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 GNB2P62879 340 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 SRYQ05066 204 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 PEAR1Q5VY43 1037 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-206ENST00000436282 ACSM6Q6P461 480 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
TOP3B-206ENST00000436282 TNRC6AQ8NDV7 1962 aaKnown RBP12.64□□□□□ -0.39
TOP3B-206ENST00000436282 NPIPB11E5RHQ5 1161 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 VENTXO95231 258 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 CNN1P51911 297 aaKnown RBP12.64□□□□□ -0.39
TOP3B-206ENST00000436282 ERVFC1-1P60608 527 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 TLE1Q04724 770 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 C9orf135Q5VTT2 229 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 KCNIP4Q6PIL6 250 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 SLC23A3Q6PIS1 610 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 TMEM14EPQ6UXP3 125 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 ATG101Q9BSB4 218 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 LIN7CQ9NUP9 197 aaKnown RBP12.64□□□□□ -0.39
TOP3B-206ENST00000436282 OR1A1Q9P1Q5 309 aa12.64□□□□□ -0.39
TOP3B-206ENST00000436282 A0A1B0GWJ7 208 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
TOP3B-206ENST00000436282 SYNGR1O43759 233 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 CYB561P49447 251 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 ZXDAP98168 799 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 ZNF585BQ52M93 769 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 TEX38Q6PEX7 206 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 MRPL21Q7Z2W9 205 aaKnown RBP12.63□□□□□ -0.39
TOP3B-206ENST00000436282 RDH5Q92781 318 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 TECTAO75443 2155 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 FAM90A26D6RGX4 464 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.63□□□□□ -0.39
TOP3B-206ENST00000436282 M0R143 59 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 HS3ST1O14792 307 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 LCN2P80188 198 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 OR8G2PQ6IF36 304 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 PPP1R3CQ9UQK1 317 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 IGHEP01854 428 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 MBP02144 154 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 CASP6P55212 293 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 C1orf194Q5T5A4 169 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 GATAD1Q8WUU5 269 aa12.63□□□□□ -0.39
TOP3B-206ENST00000436282 THOC3Q96J01 351 aaKnown RBP12.63□□□□□ -0.39
TOP3B-206ENST00000436282 FKBP11Q9NYL4 201 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms