RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DPF1Q92782 380 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 NABP2Q9BQ15 211 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 NICN1Q9BSH3 213 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 YTHDF1Q9BYJ9 559 aaKnown RBP11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 C12orf4Q9NQ89 552 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 PGPEP1Q9NXJ5 209 aa11.44□□□□□ -0.58
NIF3L1-205ENST00000409588 OR5H14A6NHG9 310 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 LINC01548A6NM66 108 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 FOXI3A8MTJ6 420 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 SOCS1O15524 211 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 DENRO43583 198 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 RBBP9O75884 186 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 DIRAS3O95661 229 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 IGHG4P01861 327 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 CEACAM6P40199 344 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 SERPINB10P48595 397 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 TMEM50BP56557 158 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 GABARAPL2P60520 117 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 ACTBP60709 375 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 MRPS15P82914 257 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 KIR2DS1Q14954 304 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 ARL6IP1Q15041 203 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 P2RY14Q15391 338 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 MMDQ15546 238 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 LIN54Q6MZP7 749 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 PTX4Q96A99 478 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 CNBD2Q96M20 576 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 Q9H521 79 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 KIAA1456Q9P272 454 aa11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
NIF3L1-205ENST00000409588 SAA2-SAA4A0A096LPE2 208 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 TRDV1A0A1B0GX56 115 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 NBR2O15453 112 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 HSPA12AO43301 675 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 HLA-DRB1P01911 266 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 SAA2P0DJI9 122 aaPredicted RBP11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 VEGFCP49767 419 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 GNMTQ14749 295 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 Q6ZPA2 131 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 OR8U1Q8NH10 309 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 SETD6Q8TBK2 473 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 MRAPQ8TCY5 172 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 P2RX4Q99571 388 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 GFI1Q99684 422 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 CMSS1Q9BQ75 279 aaKnown RBP11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 AGMATQ9BSE5 352 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 Q9N2K0 584 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 NDUFB11Q9NX14 153 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 AK3Q9UIJ7 227 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 LINC00527Q9UJ94 153 aa11.42□□□□□ -0.58
NIF3L1-205ENST00000409588 A0A0A6YYD4 124 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 METTL21EPA6NDL7 271 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 TRDCB7Z8K6 153 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 LDLRAD4O15165 306 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 NDUFA3O95167 84 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 RAB6AP20340 208 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 GADD45AP24522 165 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 MYL9P24844 172 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 MAP2K4P45985 399 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 CFHR3Q02985 330 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 EGFEM1PQ0D2K5 195 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 DCTN2Q13561 401 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 SRSF7Q16629 238 aaKnown RBP eCLIP11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 C5orf64Q2M2E5 130 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF660Q6AZW8 331 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 PECRQ9BY49 303 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 MRPL20Q9BYC9 149 aaKnown RBP11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 IFI27L2Q9H2X8 130 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 OR51J1Q9H342 316 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 AURKAIP1Q9NWT8 199 aaPredicted RBP11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 GAB2Q9UQC2 676 aa11.41□□□□□ -0.58
NIF3L1-205ENST00000409588 IFITM5A6NNB3 132 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 CCL24O00175 119 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 PSMB8P28062 276 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 OR3A3P47888 321 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 HLA-DRB3P79483 266 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 TAGLNQ01995 201 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 TMEM267Q0VDI3 215 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 TMEM65Q6PI78 240 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 C8orf86Q6ZUL3 223 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 TCTEX1D1Q8N7M0 179 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 OR5AN1Q8NGI8 311 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 OR4A4PQ8NGN8 299 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 FCGR1BQ92637 280 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 RAB3CQ96E17 227 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 ARHGAP5-AS1Q96IT6 56 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 KCTD7Q96MP8 289 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 C11orf54Q9H0W9 315 aaPredicted RBP11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 ZNF221Q9UK13 617 aa11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
NIF3L1-205ENST00000409588 RPLP1P05386 114 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 GSTP1P09211 210 aaKnown RBP11.39□□□□□ -0.59
NIF3L1-205ENST00000409588 CD3GP09693 182 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms