RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RCC1LQ96I51 464 aaKnown RBP13.33□□□□□ -0.28
BRCC3-202ENST00000340647 ABHD14BQ96IU4 210 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 RASL11BQ9BPW5 248 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 PLGRKTQ9HBL7 147 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 Q9N2K0 584 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 LRRC42Q9Y546 428 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 V9GY05 133 aa13.33□□□□□ -0.28
BRCC3-202ENST00000340647 IGHV7-81A0A0B4J1V7 117 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 WI2-2373I1.2A0A1W2PRP0 233 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 G3V318 75 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 ARL6IP5O75915 188 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 NDUFA3O95167 84 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 IGHG4P01861 327 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 PSMB8P28062 276 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 HOXD3P31249 432 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-202ENST00000340647 SOX6P35712 828 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 HLA-DRB3P79483 266 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 NDPQ00604 133 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 DEFB136Q30KP8 78 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 C19orf54Q5BKX5 351 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 HES5Q5TA89 166 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 TEX38Q6PEX7 206 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 GLDNQ6ZMI3 551 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-202ENST00000340647 ZNF367Q7RTV3 350 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 ZNF695Q8IW36 515 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 NPBQ8NG41 125 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 OR2AK2Q8NG84 335 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 C11orf54Q9H0W9 315 aaPredicted RBP13.32□□□□□ -0.28
BRCC3-202ENST00000340647 KLK15Q9H2R5 256 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 NDUFB11Q9NX14 153 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 SLC23A1Q9UHI7 598 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 RAB26Q9ULW5 256 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 FBXO7Q9Y3I1 522 aa13.32□□□□□ -0.28
BRCC3-202ENST00000340647 A0A0B4J203 849 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 ITGB1BP1O14713 200 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 ATP6V1G2O95670 118 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 MYCNOSP40205 109 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 SLC35B1P78383 322 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 FOXE3Q13461 319 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 MMDQ15546 238 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 SETD6Q8TBK2 473 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 KCTD7Q96MP8 289 aa13.31□□□□□ -0.28
BRCC3-202ENST00000340647 URM1Q9BTM9 101 aaKnown RBP13.31□□□□□ -0.28
BRCC3-202ENST00000340647 TRAV1-2A0A0B4J238 106 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 RAB27BO00194 218 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 FCN1O00602 326 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 RGS11O94810 467 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 HLA-DRB1P01911 266 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 ELANEP08246 267 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 CDX1P47902 265 aaPredicted RBP13.3□□□□□ -0.28
BRCC3-202ENST00000340647 HSPA13P48723 471 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 C5orf64Q2M2E5 130 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 FAM71F2Q6NXP2 309 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 FAM131AQ6UXB0 335 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 MOB1BQ7L9L4 216 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 PTX4Q96A99 478 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 RIMS4Q9H426 269 aaPredicted RBP13.3□□□□□ -0.28
BRCC3-202ENST00000340647 CHMP1AQ9HD42 196 aaPredicted RBP13.3□□□□□ -0.28
BRCC3-202ENST00000340647 ABRACLQ9P1F3 81 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 STEAP1Q9UHE8 339 aa13.3□□□□□ -0.28
BRCC3-202ENST00000340647 TRDV1A0A1B0GX56 115 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 H0YJW9 148 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 CCL24O00175 119 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 ATP6V0E1O15342 81 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 NBR2O15453 112 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 DENRO43583 198 aaKnown RBP13.29□□□□□ -0.28
BRCC3-202ENST00000340647 IGLV1-40P01703 118 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 CD3GP09693 182 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 EGR2P11161 476 aaPredicted RBP13.29□□□□□ -0.28
BRCC3-202ENST00000340647 SLC6A1P30531 599 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 CEACAM6P40199 344 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 KIR2DS1Q14954 304 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 ASPHD1Q5U4P2 390 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 OR5AN1Q8NGI8 311 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 C5orf30Q96GV9 206 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 TOLLIPQ9H0E2 274 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 OR51J1Q9H342 316 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 PIPOXQ9P0Z9 390 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 WSB1Q9Y6I7 421 aa13.29□□□□□ -0.28
BRCC3-202ENST00000340647 IFITM5A6NNB3 132 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 NUDT19A8MXV4 375 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 RAB29O14966 203 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 SOX15O60248 233 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 UBE2UQ5VVX9 321 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 SPARTQ8N0X7 666 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 ZNF383Q8NA42 475 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 CMSS1Q9BQ75 279 aaKnown RBP13.28□□□□□ -0.28
BRCC3-202ENST00000340647 GNB4Q9HAV0 340 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 C12orf4Q9NQ89 552 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
BRCC3-202ENST00000340647 RAB22AQ9UL26 194 aa13.28□□□□□ -0.28
BRCC3-202ENST00000340647 TNCP24821 2201 aa13.27□□□□□ -0.28
BRCC3-202ENST00000340647 IGKV1D-8A0A087WSZ0 117 aa13.27□□□□□ -0.29
BRCC3-202ENST00000340647 MFNGO00587 321 aa13.27□□□□□ -0.29
BRCC3-202ENST00000340647 DUS4LO95620 317 aaKnown RBP13.27□□□□□ -0.29
BRCC3-202ENST00000340647 GABARAPL2P60520 117 aa13.27□□□□□ -0.29
BRCC3-202ENST00000340647 FHL3Q13643 280 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms