RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PTX4Q96A99 478 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 ABCA7Q8IZY2 2146 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 FBLL1A6NHQ2 334 aaKnown RBP13.92□□□□□ -0.18
NPHP3-201ENST00000337331 PAGE4O60829 102 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 SNURFLB1AK76 121 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 ABHD3Q8WU67 409 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 MOB3AQ96BX8 217 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 HEATR5AQ86XA9 2040 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 MT-CO3P00414 261 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 SLC22A18ASQ8N1D0 253 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 GBGT1Q8N5D6 347 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 OR2M3Q8NG83 312 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 KIF26BQ2KJY2 2108 aa13.92□□□□□ -0.18
NPHP3-201ENST00000337331 IL11P20809 199 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 PIGYQ3MUY2 71 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 SPINK9Q5DT21 86 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 CXorf66Q5JRM2 361 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 LYG1Q8N1E2 194 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 TMEM230Q96A57 120 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 SF3B5Q9BWJ5 86 aaKnown RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 OR2D2Q9H210 308 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 RBKSQ9H477 322 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 SCN10AQ9Y5Y9 1956 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 ACACAQ13085 2346 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 A0A1B0GU03 582 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 RPS4Y1P22090 263 aaKnown RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 MRGPRDQ8TDS7 321 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 RTBDNQ9BSG5 229 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 WFDC1Q9HC57 220 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF236Q9UL36 1845 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 CHEK1O14757 476 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 SYNGR2O43760 224 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF83P51522 516 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 MEF2BQ02080 365 aaPredicted RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 GAPTQ8N292 157 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 TMEM106BQ9NUM4 274 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 MPC1Q9Y5U8 109 aa13.91□□□□□ -0.18
NPHP3-201ENST00000337331 NYNRINQ9P2P1 1898 aaKnown RBP13.91□□□□□ -0.18
NPHP3-201ENST00000337331 TRAV39A0A0B4J263 110 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 J3QR89 54 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 SRSF4Q08170 494 aaKnown RBP13.9□□□□□ -0.18
NPHP3-201ENST00000337331 POM121L2Q96KW2 1035 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 SDF2L1Q9HCN8 221 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 TCFL5Q9UL49 500 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 CTSBP07858 339 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 MDH2P40926 338 aaKnown RBP13.9□□□□□ -0.18
NPHP3-201ENST00000337331 C1orf100Q5SVJ3 147 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 TUSC5Q8IXB3 177 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 SMRP1Q8NCR6 262 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 GPX7Q96SL4 187 aaPredicted RBP13.9□□□□□ -0.18
NPHP3-201ENST00000337331 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 ZNF835Q9Y2P0 537 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 LOC102723971A0A1B0GUV8 181 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 PITX3O75364 302 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 HOXA6P31267 233 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 BRS3P32247 399 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
NPHP3-201ENST00000337331 SELENOKQ9Y6D0 94 aa13.9□□□□□ -0.18
NPHP3-201ENST00000337331 BRCA1P38398 1863 aaKnown RBP13.9□□□□□ -0.18
NPHP3-201ENST00000337331 GAGE10A6NGK3 116 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 CLEC3BP05452 202 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 HGFACQ04756 655 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 GAGE1Q13065 139 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 RNASEKQ6P5S7 137 aaKnown RBP13.9□□□□□ -0.19
NPHP3-201ENST00000337331 OR10G8Q8NGN5 311 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 TIMD4Q96H15 378 aa13.9□□□□□ -0.19
NPHP3-201ENST00000337331 C11orf94C9JXX5 98 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 EIF3IQ13347 325 aaKnown RBP13.89□□□□□ -0.19
NPHP3-201ENST00000337331 NIT1Q86X76 327 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 C10orf35Q96D05 121 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 LRFN3Q9BTN0 628 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 TRBV24-1A0A075B6N3 115 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 TCL1AP56279 114 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 C3AR1Q16581 482 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM108Q6UXF1 575 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM256Q8N2U0 113 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 TMEM170AQ8WVE7 144 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 RPRMQ9NS64 109 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 CDIPTO14735 213 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 COX7A2P2O60397 106 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 OR10G4Q8NGN3 311 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 OR10G9Q8NGN4 311 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 OR10G7Q8NGN6 311 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 CLDND2Q8NHS1 167 aa13.89□□□□□ -0.19
NPHP3-201ENST00000337331 ZNF501Q96CX3 271 aaPredicted RBP13.89□□□□□ -0.19
NPHP3-201ENST00000337331 POLR3KQ9Y2Y1 108 aaPredicted RBP13.89□□□□□ -0.19
NPHP3-201ENST00000337331 GOLGB1Q14789 3259 aaKnown RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 IGHV5-10-1A0A0J9YXX1 117 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 K7N7A8 449 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 TNFSF13O75888 250 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 CSN1S1P47710 185 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 ROM1Q03395 351 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 UNC119Q13432 240 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 GABRA6Q16445 453 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 IMMP2LQ96T52 175 aa13.88□□□□□ -0.19
NPHP3-201ENST00000337331 WDR61Q9GZS3 305 aaKnown RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 RBBP6Q7Z6E9 1792 aaKnown RBP13.88□□□□□ -0.19
NPHP3-201ENST00000337331 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms