RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 HBBP68871 147 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 TMEM240Q5SV17 173 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 FAM214BQ7L5A3 538 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 LANCL2Q9NS86 450 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 IGLV3-12A0A075B6K2 115 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NXPH1P58417 271 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 RPS16P62249 146 aaKnown RBP3.5□□□□□ -1.85
USH2A-201ENST00000307340 TMEM130Q8N3G9 435 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PLPPR1Q8TBJ4 325 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 FAM222BQ8WU58 562 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PGLYRP3Q96LB9 341 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 AKAP6Q13023 2319 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 FREM1Q5H8C1 2179 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NME2P1O60361 137 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 COL8A1P27658 744 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 PRR18Q8N4B5 295 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 ST20Q9HBF5 79 aa3.5□□□□□ -1.85
USH2A-201ENST00000307340 NUDT10Q8NFP7 164 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 A0A0U1RQK1 487 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ZNF320A2RRD8 509 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 HLA-DRB1P01911 266 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 RBP4P02753 201 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 DRD3P35462 400 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 PTCRAQ6ISU1 281 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 CYP2G1PQ6ZSU1 146 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR10AD1Q8NGE0 317 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR1P1Q8NH06 330 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 JMJD8Q96S16 334 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 MS4A6AQ9H2W1 248 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A10Q9UBX3 287 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC50A1Q9BRV3 221 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 C2orf88Q9BSF0 95 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TCFL5Q9UL49 500 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 WNT2P09544 360 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A35Q3KQZ1 300 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 RNF152Q8N8N0 203 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 PLSCR3Q9NRY6 295 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 MARCH11A6NNE9 402 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 B9A039 149 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 GNG7O60262 68 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SRSF5Q13243 272 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 LINC00114Q6XXX2 140 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 AP5S1Q9NUS5 200 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ASPDHA6ND91 283 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SNRPD3P62318 126 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 C10orf113Q5VZT2 155 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A48Q6ZT89 311 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 IL17FQ96PD4 163 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 EML2O95834 649 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 GLRXP35754 106 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TNFRSF9Q07011 255 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR8B12Q8NGG6 310 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 THOC3Q96J01 351 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 SNX22Q96L94 193 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 INSIG2Q9Y5U4 225 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TMEM202A6NGA9 273 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ARSAP15289 507 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TMEM11P17152 192 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SRYQ05066 204 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ZNF714Q96N38 554 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SMOC1Q9H4F8 434 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 IL21Q9HBE4 155 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC6A13Q9NSD5 602 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ST6GALNAC2Q9UJ37 374 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SIRT4Q9Y6E7 314 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 TMEM56-RWDD3S4R434 201 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 UBE2L5PA0A1B0GUS4 154 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR4C46A6NHA9 309 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OTOL1A6NHN0 477 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 YPEL1O60688 119 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 UCP1P25874 307 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 GZMMP51124 257 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 DSCR9P59020 149 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 STARD6P59095 220 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ID2Q02363 134 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 CFHR1Q03591 330 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 NEU4Q8WWR8 484 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 YPEL2Q96QA6 119 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A18Q9H1K4 315 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR2D2Q9H210 308 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ZNF552Q9H707 407 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 SMIM10L1P0DMW3 83 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 FAM109BQ6ICB4 259 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 ADAT3Q96EY9 351 aaPredicted RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 SMIM10Q96HG1 83 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLX1AQ9BQ83 275 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 G3V3Y1 287 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 DLL1O00548 723 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 RPS27LQ71UM5 84 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 OR1B1Q8NGR6 318 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 ATG2AQ2TAZ0 1938 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TRBV6-6A0A0A6YYG2 114 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 C9JCJ5 164 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 TNFRSF1BP20333 461 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 UBE2L3P68036 154 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 SRSF4Q08170 494 aaKnown RBP3.49□□□□□ -1.85
USH2A-201ENST00000307340 ZNF721Q8TF20 911 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 SLC25A38Q96DW6 304 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 GAB2Q9UQC2 676 aa3.49□□□□□ -1.85
USH2A-201ENST00000307340 CDC14CA4D256 554 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms