RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Csf3P09920 208 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 PtgfrP43117 366 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cd7P50283 210 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr688Q6W049 321 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr305Q7TS02 319 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mrps26Q80ZS3 200 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Xkr8Q8C0T0 401 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Spem2Q8C5U4 503 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Lyrm2Q8R033 88 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mfsd6lQ8R3N2 586 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Sft2d2Q8VD57 159 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr24Q8VFM9 313 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1201Q8VGF5 307 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Lmo1Q924W9 156 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tmem88Q9D0N8 159 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Srp19Q9D7A6 144 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Pmaip1Q9JM54 103 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr785A0A0N4SVC3 312 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr914E9PW59 316 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ankrd66J3QNN4 192 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Hprt1P00493 218 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 IfngP01580 155 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rps10P63325 165 aaKnown RBP11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm21093Q6GQS8 569 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Stoml3Q6PE84 287 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cd200r4Q6XJV4 270 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Sys1Q78S06 156 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Bpifb3Q80ZU7 473 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mfsd8Q8BH31 519 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tmprss11fQ8BHM9 439 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cd226Q8K4F0 333 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r220Q8R272 298 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Znf385aQ8VD12 386 aaKnown RBP11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr129Q8VEY1 330 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1368Q8VFG3 314 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr802Q8VGJ2 312 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gje1Q9CX92 205 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ube2v2Q9D2M8 145 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Q9D9C7 252 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Hsd17b11Q9EQ06 298 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fbxo6Q9QZN4 295 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Xcr1Q9R0M1 322 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wif1Q9WUA1 379 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Timm9Q9WV98 89 aaKnown RBP11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Angpt4Q9WVH6 509 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Rev3lQ61493 3122 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm9573F7C950 1606 aa11.69□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ighv6-4A0A0A6YX19 119 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1490A0A1L1SVH0 321 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Fam53aE9PV82 402 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm10037E9PX85 104 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm8265K7N6Y8 158 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm3573L7N292 184 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Igk-V19-17P01633 149 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 PdgfbP31240 241 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Cd84Q18PI6 329 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Nr2c2apQ3TV70 140 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ypel4Q65Z93 127 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Il17fQ7TNI7 161 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp87Q8K2A4 540 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr1412Q8VET3 321 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr52Q8VFL0 319 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr638Q8VH20 321 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 RhebQ921J2 184 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ypel1Q9ESC7 118 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 NagkQ9QZ08 343 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Sdk2Q6V4S5 2176 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Igkv6-25A0A140T8N7 115 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ube2dnl2A2AFH2 155 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm42421F6X8D5 166 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn2r60L7N2A1 853 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Lyz2P08905 148 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 CtsaP16675 474 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Prr27Q3SYJ2 352 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Kat7Q5SVQ0 613 aaKnown RBP11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Alkal2Q80UG6 151 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm5662Q8BX20 144 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr827Q8VEV5 322 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr157Q9QZ20 318 aa11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 StrapQ9Z1Z2 350 aaKnown RBP11.68□□□□□ -0.54
Nup88-201ENSMUST00000035283 Trbv12-1A0A0B4J1H0 124 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Gm45783A0A1B0GT48 74 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 BC048679D3YXE9 172 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr913E9Q716 312 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Zfp108E9Q8I5 642 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 D430019H16RikJ3QPM6 83 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Atf6bO35451 699 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 EnamO55196 1274 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 GusbP12265 648 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mdga2P60755 949 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Vmn1r181Q0P547 304 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Tas2r120Q7M721 295 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ppp1r14dQ7TT52 146 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 SetmarQ80UJ9 309 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 PhyhiplQ8BGT8 375 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Wbp1lQ8BGW2 348 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Ppp1r3bQ8C767 284 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr446Q8VEV0 308 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Olfr350Q8VFP8 312 aa11.67□□□□□ -0.54
Nup88-201ENSMUST00000035283 Mrgpra6Q91ZC6 301 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms