RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	MPI	P34949	423 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	P2RX1	P51575	399 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	DSCR4	P56555	118 aa	Predicted RBP	4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	BCL2A1	Q16548	175 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	C5orf64	Q2M2E5	130 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	ASCL4	Q6XD76	172 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	GALNT10	Q86SR1	603 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	OR2M3	Q8NG83	312 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	C16orf78	Q8WTQ4	265 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	UQCC2	Q9BRT2	126 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	EBPL	Q9BY08	206 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	EDA2R	Q9HAV5	297 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	NOX3	Q9HBY0	568 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	SDHAF3	Q9NRP4	125 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	TAS2R9	Q9NYW1	312 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	VPS29	Q9UBQ0	182 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	TIMM22	Q9Y584	194 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	ATR	Q13535	2644 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CR1	P17927	2039 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	FBN3	Q75N90	2809 aa		4.29	□□□□□ -1.72
SMARCA2-238	ENST00000635273	YLPM1	P49750	1951 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CENPX	A8MT69	81 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	FADS1	O60427	444 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	PSG2	P11465	335 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	RAB5A	P20339	215 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	GABRA3	P34903	492 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	EVI2B	P34910	448 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	ZNF133	P52736	654 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CTBP2	P56545	445 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	UBE2N	P61088	152 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	RPS23	P62266	143 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CAV1	Q03135	178 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	C2orf80	Q0P641	193 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	ERCC8	Q13216	396 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	DGCR6	Q14129	220 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CLEC12B	Q2HXU8	276 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	SIKE1	Q9BRV8	207 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	AGMAT	Q9BSE5	352 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	REG4	Q9BYZ8	158 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	STMN4	Q9H169	189 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	IFI27L2	Q9H2X8	130 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	SAV1	Q9H4B6	383 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273	RNF122	Q9H9V4	155 aa		4.28	□□□□□ -1.72
SMARCA2-238	ENST00000635273		A8MT66	165 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ANKRD65	E5RJM6	399 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273		H3BN98	237 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	IGKV1D-16	P01601	117 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	BCHE	P06276	602 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	SOD3	P08294	240 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	CASQ1	P31415	396 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	PHB	P35232	272 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	TMED1	Q13445	227 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	NAB1	Q13506	487 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	SLC35D2	Q76EJ3	337 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	OR2W3	Q7Z3T1	314 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	FAM9C	Q8IZT9	166 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	COX18	Q8N8Q8	333 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ASCC1	Q8N9N2	400 aa	Known RBP	4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	GATS	Q8NAP1	163 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ATP6V1C2	Q8NEY4	427 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	OR10D3	Q8NH80	312 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ZNF675	Q8TD23	568 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ABHD3	Q8WU67	409 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	IFT81	Q8WYA0	676 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	RGP1	Q92546	391 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	S100PBP	Q96BU1	408 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	SGTB	Q96EQ0	304 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ZNF799	Q96GE5	643 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	MRPL57	Q9BQC6	102 aa	Known RBP	4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	TBL1XR1	Q9BZK7	514 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	TMEM216	Q9P0N5	145 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	PYCARD	Q9ULZ3	195 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	FLVCR2	Q9UPI3	526 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273	WSB1	Q9Y6I7	421 aa		4.27	□□□□□ -1.73
SMARCA2-238	ENST00000635273		A0A0J9YW62	118 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	GOLGA8R	I6L899	631 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	NDUFS8	O00217	210 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	UPK1A	O00322	258 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	RP2	O75695	350 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	RPS17	P08708	135 aa	Known RBP	4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	TLX1NB	P0CAT3	122 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	TAC1	P20366	129 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	PFN2	P35080	140 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	FOXA1	P55317	472 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	KIR2DS1	Q14954	304 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	GUSBP1	Q15486	140 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ZNHIT3	Q15649	155 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	CPTP	Q5TA50	214 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	HBM	Q6B0K9	141 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	FAM58A	Q8N1B3	248 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	MMGT1	Q8N4V1	131 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	CCNYL1	Q8N7R7	359 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	C15orf56	Q8N910	161 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	OR11H7	Q8NGC8	314 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	OR10W1	Q8NGF6	305 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	OR6K3	Q8NGY3	331 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	ZNF596	Q8TC21	504 aa		4.26	□□□□□ -1.73
SMARCA2-238	ENST00000635273	BAALC	Q8WXS3	180 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms