RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 LY6G6FQ5SQ64 297 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 TEX38Q6PEX7 206 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 SVOPQ8N4V2 548 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 OR6M1Q8NGM8 313 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 GALMQ96C23 342 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 RASL11BQ9BPW5 248 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
USB1-205ENST00000561743 SAA2-SAA4A0A096LPE2 208 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 NUDT19A8MXV4 375 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 RGS10O43665 173 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 RPLP1P05386 114 aaKnown RBP10.6□□□□□ -0.71
USB1-205ENST00000561743 HSMCR30P0CW71 290 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 SAA2P0DJI9 122 aaPredicted RBP10.6□□□□□ -0.71
USB1-205ENST00000561743 CRHBPP24387 322 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 BLVRBP30043 206 aaPredicted RBP10.6□□□□□ -0.71
USB1-205ENST00000561743 SOX6P35712 828 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 CFHR3Q02985 330 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 EGFEM1PQ0D2K5 195 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 PNLIPRP3Q17RR3 467 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 ZNF880Q6PDB4 577 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 ZNF833PQ6ZTB9 187 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 P2RX4Q99571 388 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 NABP2Q9BQ15 211 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 GON7Q9BXV9 100 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 MRPL20Q9BYC9 149 aaKnown RBP10.6□□□□□ -0.71
USB1-205ENST00000561743 LPAR5Q9H1C0 372 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 IFI27L2Q9H2X8 130 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 ISYNA1Q9NPH2 558 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 LRRC42Q9Y546 428 aa10.6□□□□□ -0.71
USB1-205ENST00000561743 K7EIL1 84 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 SLC17A2O00624 439 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 RRP9O43818 475 aaKnown RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 RGS11O94810 467 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 SLC2A2P11168 524 aaPredicted RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 CPEP16870 476 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 HOXD3P31249 432 aaPredicted RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 MYCNOSP40205 109 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 OR3A3P47888 321 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 MLLT11Q13015 90 aaPredicted RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 FOXE3Q13461 319 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 P2RY14Q15391 338 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 MMDQ15546 238 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 TRAM1Q15629 374 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 PRSS48Q7RTY5 328 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 OR2AK2Q8NG84 335 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 IL1F10Q8WWZ1 152 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 RAX2Q96IS3 184 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 RITA1Q96K30 269 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 DUX3Q96PT4 197 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 PLGRKTQ9HBL7 147 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 ABRACLQ9P1F3 81 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 ZNF580Q9UK33 172 aa10.59□□□□□ -0.71
USB1-205ENST00000561743 AK6Q9Y3D8 172 aaKnown RBP10.59□□□□□ -0.71
USB1-205ENST00000561743 FOXI3A8MTJ6 420 aaPredicted RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 SOCS1O15524 211 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 ARL6IP5O75915 188 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 IGHG4P01861 327 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 IGF1P05019 195 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 ARSBP15848 533 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 PSMA1P25786 263 aaKnown RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 CNTFRP26992 372 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 MAP2K4P45985 399 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 ACTBP60709 375 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 FABP5Q01469 135 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 CXorf66Q5JRM2 361 aaPredicted RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 MOB1BQ7L9L4 216 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 FAM89BQ8N5H3 189 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 SETD6Q8TBK2 473 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 MGLLQ99685 303 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 ZNF251Q9BRH9 671 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 HDHD3Q9BSH5 251 aaPredicted RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 CCDC90BQ9GZT6 254 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 PARP12Q9H0J9 701 aaKnown RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 PLEKHJ1Q9NW61 149 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 STEAP1Q9UHE8 339 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 ZNF107Q9UII5 783 aaPredicted RBP10.58□□□□□ -0.72
USB1-205ENST00000561743 AK3Q9UIJ7 227 aa10.58□□□□□ -0.72
USB1-205ENST00000561743 TRBV6-6A0A0A6YYG2 114 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 WI2-2373I1.2A0A1W2PRP0 233 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 ST8SIA5O15466 376 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 ELANEP08246 267 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 VDAC1P21796 283 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 CALRP27797 417 aaKnown RBP10.57□□□□□ -0.72
USB1-205ENST00000561743 CLDN12P56749 244 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 RAB11BQ15907 218 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 DEFB136Q30KP8 78 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 FAM71F2Q6NXP2 309 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 KCTD7Q96MP8 289 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 URM1Q9BTM9 101 aaKnown RBP10.57□□□□□ -0.72
USB1-205ENST00000561743 GPR61Q9BZJ8 451 aa10.57□□□□□ -0.72
USB1-205ENST00000561743 RIMS4Q9H426 269 aaPredicted RBP10.57□□□□□ -0.72
USB1-205ENST00000561743 CCL24O00175 119 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 NBR2O15453 112 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 HLA-DRB1P01911 266 aa10.56□□□□□ -0.72
USB1-205ENST00000561743 PSMB8P28062 276 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms