RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 RBM7Q9Y580 266 aaKnown RBP7.11□□□□□ -1.27
TRAF3-209ENST00000560463 TET2Q6N021 2002 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-209ENST00000560463 MAP1AP78559 2803 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-209ENST00000560463 VPS13CQ709C8 3753 aa7.11□□□□□ -1.27
TRAF3-209ENST00000560463 MED13LQ71F56 2210 aa7.11□□□□□ -1.27
TRAF3-209ENST00000560463 IGKV1D-13A0A0B4J2D9 117 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 PIGBOS1A0A0B4J2F0 54 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 hCG_1809904A0A1W2PP81 198 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 A0A1W2PPE2 198 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 A0A1W2PR64 198 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 A0A1W2PRV1 198 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 C9orf170A2RU37 121 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 SFT2D2O95562 160 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 IFNA2P01563 188 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 IGKV1-13P0DP09 117 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 COL8A1P27658 744 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 RAB7AP51149 207 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ATP5J2P56134 94 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 PPP1R1AQ13522 171 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ESCO2Q56NI9 601 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 CLEC2AQ6UVW9 174 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ZNF818PQ6ZRF7 136 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 TCF23Q7RTU1 214 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 AKAP14Q86UN6 197 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 LDLRAD3Q86YD5 345 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 FGFRL1Q8N441 504 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 C12orf45Q8N5I9 185 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ZNF525Q8N782 197 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ZNF645Q8N7E2 425 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 LY6G5BQ8NDX9 201 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 BVESQ8NE79 360 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 OR2AK2Q8NG84 335 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 OR52L2PQ8NGH6 319 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 UBALD1Q8TB05 177 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 MITD1Q8WV92 249 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 SSBP3Q9BWW4 388 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-209ENST00000560463 SUCNR1Q9BXA5 334 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 NAA60Q9H7X0 242 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 CCL28Q9NRJ3 127 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 BEX4Q9NWD9 120 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-209ENST00000560463 GFOD1Q9NXC2 390 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 RPUSD1Q9UJJ7 312 aaKnown RBP7.1□□□□□ -1.27
TRAF3-209ENST00000560463 GAB2Q9UQC2 676 aa7.1□□□□□ -1.27
TRAF3-209ENST00000560463 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
TRAF3-209ENST00000560463 IGHV3-43A0A0B4J1X8 118 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 PPIAL4CA0A0B4J2A2 164 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 TEX13DA0A0J9YY54 714 aaPredicted RBP7.09□□□□□ -1.27
TRAF3-209ENST00000560463 RNF212BA8MTL3 300 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 C17orf98A8MV24 154 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 MPPED1O15442 326 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 CCNKO75909 580 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 IGHV2-5P01817 119 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 LIPFP07098 398 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 OR8U9P0C7N5 309 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 SULT1A3P0DMM9 295 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 SULT1A4P0DMN0 295 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 IGHV3-43DP0DP04 118 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 HLA-GP17693 338 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 PI3P19957 117 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 VAMP1P23763 118 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 PPP1CCP36873 323 aaKnown RBP7.09□□□□□ -1.27
TRAF3-209ENST00000560463 DLX6P56179 175 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 SUPT4H1P63272 117 aaKnown RBP7.09□□□□□ -1.27
TRAF3-209ENST00000560463 ZNF273Q14593 569 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 C1orf122Q6ZSJ8 110 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 LRRC75A-AS1Q8N1F1 130 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 TCTEX1D1Q8N7M0 179 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 C8orf31Q8N9H6 132 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 OR52B4Q8NGK2 314 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 OR8U1Q8NH10 309 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 COQ8AQ8NI60 647 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 C10orf105Q8TEF2 133 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 RTN4IP1Q8WWV3 396 aaPredicted RBP7.09□□□□□ -1.27
TRAF3-209ENST00000560463 ASB13Q8WXK3 278 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 NEURL2Q9BR09 285 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 AGMATQ9BSE5 352 aa7.09□□□□□ -1.27
TRAF3-209ENST00000560463 FASNP49327 2511 aaKnown RBP7.09□□□□□ -1.27
TRAF3-209ENST00000560463 POLQO75417 2590 aa7.09□□□□□ -1.28
TRAF3-209ENST00000560463 FBN2P35556 2912 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 LOC105371242A0A075B767 164 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 A0A087X0M5 115 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 A0A1B0GX30 115 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 DBX1A6NMT0 343 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 A8MXK9 166 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 VWC2LB2RUY7 222 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 M0R1W7 72 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 HSD17B6O14756 317 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 SLC25A16P16260 332 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 OMGP23515 440 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 DNASE1P24855 282 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 NFYBP25208 207 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 CD34P28906 385 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 LMO4P61968 165 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 SRPXP78539 464 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 GNMTQ14749 295 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 LTC4SQ16873 150 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 PHLDA2Q53GA4 152 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 LIN54Q6MZP7 749 aa7.08□□□□□ -1.28
TRAF3-209ENST00000560463 TBC1D26Q86UD7 250 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms