RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 S1PR3Q99500 378 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 RASL11BQ9BPW5 248 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 HSPB9Q9BQS6 159 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 ABHD14AQ9BUJ0 271 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 TM2D1Q9BX74 207 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 RAB9BQ9NP90 201 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 ISYNA1Q9NPH2 558 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 ACOT13Q9NPJ3 140 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 RNF150Q9ULK6 438 aa9.88□□□□□ -0.83
SMAD3-208ENST00000558827 A0A075B6Q4 140 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 NUDT19A8MXV4 375 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 FGF16O43320 207 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 ARL6IP5O75915 188 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 CD37P11049 281 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 GPR12P47775 334 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 HSPA13P48723 471 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 TMEM50BP56557 158 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 LSAMPQ13449 338 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 TRAM1Q15629 374 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 HMGN3Q15651 99 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 RPL39P5Q59GN2 51 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 GLDNQ6ZMI3 551 aaPredicted RBP9.87□□□□□ -0.83
SMAD3-208ENST00000558827 C8orf86Q6ZUL3 223 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 ZNF367Q7RTV3 350 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 IZUMO1Q8IYV9 350 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 STPG2Q8N412 459 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 SVOPQ8N4V2 548 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 FAM3DQ96BQ1 224 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 ABHD14BQ96IU4 210 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 URM1Q9BTM9 101 aaKnown RBP9.87□□□□□ -0.83
SMAD3-208ENST00000558827 ABRACLQ9P1F3 81 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 OR1A1Q9P1Q5 309 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 JPT1Q9UK76 154 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 V9GY05 133 aa9.87□□□□□ -0.83
SMAD3-208ENST00000558827 SAA2-SAA4A0A096LPE2 208 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 TMEM272A0A1B0GTI8 110 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 LANCL1O43813 399 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 NAPSAO96009 420 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 IGHG2P01859 326 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 SCTP09683 121 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 SAA2P0DJI9 122 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-208ENST00000558827 TBCEQ15813 527 aaPredicted RBP9.86□□□□□ -0.83
SMAD3-208ENST00000558827 MOGAT2Q3SYC2 334 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 C22orf42Q6IC83 251 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 OR2W3Q7Z3T1 314 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 FOXRED2Q8IWF2 684 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 OR2AK2Q8NG84 335 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 CHPT1Q8WUD6 406 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 PHF21AQ96BD5 680 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 NABP2Q9BQ15 211 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 PECRQ9BY49 303 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 ABCG5Q9H222 651 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 SLC23A1Q9UHI7 598 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 WSB1Q9Y6I7 421 aa9.86□□□□□ -0.83
SMAD3-208ENST00000558827 DENRO43583 198 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 YPEL1O60688 119 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 RGS11O94810 467 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 CD3GP09693 182 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 SNRPBP14678 240 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 PSMA1P25786 263 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 PSMB9P28065 219 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 HOXD3P31249 432 aaPredicted RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 CEACAM6P40199 344 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 ZNF137PP52743 207 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 RAB25P57735 213 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 LINC00205P59089 165 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 RPL23AP62750 156 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 HTD2P86397 168 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 MMDQ15546 238 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 TMEM30BQ3MIR4 351 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 Q3ZCU0 254 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 PLAC9Q5JTB6 97 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 FOXB2Q5VYV0 432 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 ZNF880Q6PDB4 577 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 KLHL30-AS1Q8NEE0 82 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 MAFIPQ8WZ33 124 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 YPEL2Q96QA6 119 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 CMSS1Q9BQ75 279 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 IFI27L2Q9H2X8 130 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 LIN7CQ9NUP9 197 aaKnown RBP9.85□□□□□ -0.83
SMAD3-208ENST00000558827 STEAP1Q9UHE8 339 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 BLOC1S6Q9UL45 172 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 DNAH3Q8TD57 4116 aa9.85□□□□□ -0.83
SMAD3-208ENST00000558827 FOXI3A8MTJ6 420 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-208ENST00000558827 HSPA12AO43301 675 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 ACTBP60709 375 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 SLC35B1P78383 322 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 HLA-DRB3P79483 266 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 DEFB136Q30KP8 78 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 FAM131AQ6UXB0 335 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 ETV3LQ6ZN32 361 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 FAM89BQ8N5H3 189 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 DRAXINQ8NBI3 349 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-208ENST00000558827 ZNF251Q9BRH9 671 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 C11orf54Q9H0W9 315 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-208ENST00000558827 Q9N2K0 584 aa9.84□□□□□ -0.83
SMAD3-208ENST00000558827 AURKAIP1Q9NWT8 199 aaPredicted RBP9.84□□□□□ -0.83
SMAD3-208ENST00000558827 LRRC42Q9Y546 428 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 131.6 ms