RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 DOK3Q7L591 496 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 C11orf53Q8IXP5 236 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 MTURNQ8N3F0 131 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 GDPD1Q8N9F7 314 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 NECAP1Q8NC96 275 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 OR8S1Q8NH09 359 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 Q8TCH9 128 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 HAVCR2Q8TDQ0 301 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 OR5P3Q8WZ94 311 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 TIMD4Q96H15 378 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 LINC00052Q96N35 136 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 THAP7Q9BT49 309 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 NDUFAF3Q9BU61 184 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 ADAT1Q9BUB4 502 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 NXF2Q9GZY0 626 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 AKIP1Q9NQ31 210 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 GPR173Q9NS66 373 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 MED9Q9NWA0 146 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 PIGLQ9Y2B2 252 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 EXOSC1Q9Y3B2 195 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 WIPI2Q9Y4P8 454 aa5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 TSSC4Q9Y5U2 329 aaPredicted RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 CHD3Q12873 2000 aaKnown RBP5.25□□□□□ -1.57
ATPAF1-209ENST00000529214 A0A1B0GVI7 797 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 LRP5LA4QPB2 252 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 OR4C45A6NMZ5 311 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 CYB5BO43169 146 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 SYT7O43581 403 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ATG12O94817 140 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 NRASP01111 189 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 LHBP01229 141 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 MYL12AP19105 171 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 PTGFRP43088 359 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ZNF134P52741 427 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 RAP2BP61225 183 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 LMO4P61968 165 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 SELENOTP62341 195 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 KRTAP1-1Q07627 177 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ODF4Q2M2E3 257 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 CEACAM21Q3KPI0 293 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 SLC22A6Q4U2R8 563 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 OR2G6Q5TZ20 316 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ASCL4Q6XD76 172 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 TMPRSS11AQ6ZMR5 421 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 TMED4Q7Z7H5 227 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 WDR86Q86TI4 376 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 LRRC28Q86X40 367 aaPredicted RBP5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 COMMD2Q86X83 199 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 TCTE3Q8IZS6 198 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 C1orf87Q8N0U7 546 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 STPG3Q8N7X2 389 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ZNF485Q8NCK3 441 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 OR5A2Q8NGI9 324 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 CLDND2Q8NHS1 167 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 C10orf35Q96D05 121 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 MICU1Q9BPX6 476 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 ATG101Q9BSB4 218 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 SCN3BQ9NY72 215 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 CDC42EP3Q9UKI2 254 aa5.24□□□□□ -1.57
ATPAF1-209ENST00000529214 PPIAL4EA0A075B759 164 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 TRAV26-1A0A087WT03 109 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 A6NIN4 97 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 LRRC30A6NM36 301 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 PPIAL4DF5H284 164 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 H3BSH0 61 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 M0QXV9 152 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 M0R143 59 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 SLC1A7O00341 560 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 CA11O75493 328 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 IFNA7P01567 189 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 IFNA17P01571 189 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 PET100P0DJ07 73 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 PPIAL4FP0DN26 164 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 IGHV4-31P0DP07 118 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 SPP1P10451 314 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 IRF2P14316 349 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 HIST1H1BP16401 226 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 ADRA2CP18825 462 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 PVALBP20472 110 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 IL2RGP31785 369 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 CFHR2P36980 270 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 GZMKP49863 264 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 WNT4P56705 351 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 SNRPEP62304 92 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 BTG1P62324 171 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 SLC35A2P78381 396 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 ZNF154Q13106 437 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 TMEM155Q4W5P6 130 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 DMRTC1Q5HYR2 192 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 SPIN3Q5JUX0 258 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 RPL22L1Q6P5R6 122 aaKnown RBP5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 ZNF826PQ6ZT77 177 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 MOB3CQ70IA8 216 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 AHSA2Q719I0 299 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 CENPVQ7Z7K6 275 aaPredicted RBP5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 ZDHHC23Q8IYP9 409 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 Q8N402 240 aa5.23□□□□□ -1.57
ATPAF1-209ENST00000529214 OR52N4Q8NGI2 321 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms