RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PLXNA3P51805 1871 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 RALGAPA2Q2PPJ7 1873 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 MYO10Q9HD67 2058 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 A0A0G2JN53 185 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 A0A1W2PPR1 153 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 KLLNB2CW77 178 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 K7EQS6 105 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 RTL8CO15255 209 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 GALR3O60755 368 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CCDC22O60826 627 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 DCTN3O75935 186 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 SOX14O95416 240 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CA2P00918 260 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PTHP01270 115 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 IGLV2-23P01705 113 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CST2P09228 141 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 GIPP09681 153 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4Q2P0C623 313 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 IL9P15248 144 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 RAB3BP20337 219 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PPOXP50336 477 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 RPL23P62829 140 aaKnown RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PAX8Q06710 450 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CHRFAM7AQ494W8 412 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 LRRC10Q5BKY1 277 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CYB5R2Q6BCY4 276 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF774Q6NX45 483 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ARL9Q6T311 187 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CLEC20AQ6ZU45 233 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC51BQ86UW2 128 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ZBTB8OSQ8IWT0 167 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 STK40Q8N2I9 435 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 SLC35F6Q8N357 371 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 LRRC25Q8N386 305 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 DRAM1Q8N682 238 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 OR52E4Q8NGH9 312 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 OR52P1PQ8NH57 321 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4S2Q8NH73 311 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNRF2Q8NHG8 242 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 RXFP4Q8TDU9 374 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 Q8WTZ3 238 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 DCUN1D4Q92564 292 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 GALNT14Q96FL9 552 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 TEAD3Q99594 435 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 DHRS9Q9BPW9 319 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF436Q9C0F3 470 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 OR11A1Q9GZK7 315 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ABCG5Q9H222 651 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CENPHQ9H3R5 247 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PTGES2Q9H7Z7 377 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ISG20L2Q9H9L3 353 aaKnown RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 SPANXB1Q9NS25 103 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CA10Q9NS85 328 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 VNN3Q9NY84 501 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 TAS2R7Q9NYW3 318 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 TAS2R5Q9NYW4 299 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 DNAJC27Q9NZQ0 273 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PRO0628Q9UI54 55 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 PSG11Q9UQ72 335 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 ARL2BPQ9Y2Y0 163 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 KLF13Q9Y2Y9 288 aaPredicted RBP2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 NEUROG3Q9Y4Z2 214 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CSAG2Q9Y5P2 127 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 SNX10Q9Y5X0 201 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 CITO14578 2027 aa2.26□□□□□ -2.05
DEPDC1-204ENST00000489862 TECTAO75443 2155 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 IGHV6-1A0A0B4J1U7 121 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 PLAC8L1A1L4L8 177 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 MYBPHLA2RUH7 354 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 NDUFC2-KCTD14E9PQ53 114 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 CD5LO43866 347 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 UPK1BO75841 260 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 KCNK2O95069 426 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 HAND1O96004 215 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 THY1P04216 161 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 CCR2P41597 374 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 GFERP55789 205 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 PSG4Q00888 419 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 TNFRSF9Q07011 255 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 QPRTQ15274 297 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 SNRNP35Q16560 246 aaKnown RBP2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 ZNF684Q5T5D7 378 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 LAMTOR1Q6IAA8 161 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 C2orf66Q6UXQ4 117 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 IL34Q6ZMJ4 242 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 MOB1BQ7L9L4 216 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 NEGR1Q7Z3B1 354 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 TMEM144Q7Z5S9 345 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 GALNT10Q86SR1 603 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 NAA40Q86UY6 237 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 NIT1Q86X76 327 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 SMIM20Q8N5G0 67 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 OR2Z1Q8NG97 314 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 OR4M1Q8NGD0 313 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 OR10D3Q8NH80 312 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 OR10J5Q8NHC4 309 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 TAMM41Q96BW9 452 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 SMARCD1Q96GM5 515 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 PITX2Q99697 317 aa2.25□□□□□ -2.05
DEPDC1-204ENST00000489862 GNB1LQ9BYB4 327 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms