RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 RCC1P18754 421 aaPredicted RBP11.72□□□□□ -0.53
USP11-207ENST00000478596 ACTBP60709 375 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 MRPS10P82664 201 aaKnown RBP11.72□□□□□ -0.53
USP11-207ENST00000478596 PAX5Q02548 391 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 OR4F17Q8NGA8 305 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 FCAMRQ8WWV6 532 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 OR4F4Q96R69 305 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 TBX15Q96SF7 602 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 MMP28Q9H239 520 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 SCPEP1Q9HB40 452 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 SIRT7Q9NRC8 400 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 TAS2R3Q9NYW6 316 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 GNG12Q9UBI6 72 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 ZNF230Q9UIE0 474 aaPredicted RBP11.72□□□□□ -0.53
USP11-207ENST00000478596 LYSTQ99698 3801 aa11.72□□□□□ -0.53
USP11-207ENST00000478596 FAM172BPA6NC97 362 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 M0R1W7 72 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
USP11-207ENST00000478596 HSPA12AO43301 675 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 TOX4O94842 621 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 COX7A1P24310 79 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 RCVRNP35243 200 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 ERVFRD-1P60508 538 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 TRIQKQ629K1 86 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 TCF23Q7RTU1 214 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 CCDC190Q86UF4 302 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 S100ZQ8WXG8 99 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 NCOR1P1Q9H4R4 102 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 Q9N2K0 584 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 KPTNQ9Y664 436 aa11.71□□□□□ -0.53
USP11-207ENST00000478596 KBTBD11-OT1A0A1B0GTJ5 212 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 MEIOCA2RUB1 952 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 BTBD17A6NE02 478 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 TRDCB7Z8K6 153 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 C12orf77C9JDV5 145 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 BET1O15155 118 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 SSX5O60225 188 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 TPPPO94811 219 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 HBZP02008 142 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 IGLL1P15814 213 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 GZMHP20718 246 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 DGCR2P98153 550 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 KLHDC1Q8N7A1 406 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 LY6G5BQ8NDX9 201 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 BEST4Q8NFU0 473 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 OR1L1Q8NH94 360 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 GALMQ96C23 342 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 R3HDM4Q96D70 268 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 GINS4Q9BRT9 223 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 WDR12Q9GZL7 423 aaKnown RBP11.7□□□□□ -0.54
USP11-207ENST00000478596 METTL8Q9H825 291 aaKnown RBP11.7□□□□□ -0.54
USP11-207ENST00000478596 IDI2-AS1Q9NZ38 188 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 V9GYH0 126 aa11.7□□□□□ -0.54
USP11-207ENST00000478596 TRBV6-6A0A0A6YYG2 114 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 IGHV3-43A0A0B4J1X8 118 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 GABARAPH6UMI1 98 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 SULT1C2O00338 296 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 FABP7O15540 132 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 ORC5O43913 435 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 RBBP9O75884 186 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 HLA-DQB1P01920 261 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 IGHV3-43DP0DP04 118 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 PTBP1P26599 531 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP11-207ENST00000478596 OR3A3P47888 321 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 HMGN3Q15651 99 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 NCR3LG1Q68D85 454 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 OR52W1Q6IF63 320 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 PDZD9Q8IXQ8 264 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 Q8N402 240 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 GVQW1Q8N7I0 195 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 OR10V1Q8NGI7 309 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 OR5H2Q8NGV7 314 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 OR52I2Q8NH67 350 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 SMIM4Q8WVI0 70 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 CORO2AQ92828 525 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 ABHD1Q96SE0 405 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 MBNL3Q9NUK0 354 aaKnown RBP11.69□□□□□ -0.54
USP11-207ENST00000478596 SLC23A1Q9UHI7 598 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 SIGLEC9Q9Y336 463 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 SESN1Q9Y6P5 492 aa11.69□□□□□ -0.54
USP11-207ENST00000478596 RBP4P02753 201 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 IGHV1-8P0DP01 117 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 GNG10P50151 68 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 TAS2R46P59540 309 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 ZNF45Q02386 682 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
USP11-207ENST00000478596 KLRD1Q13241 179 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 TMEM30BQ3MIR4 351 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 HEPN1Q6WQI6 88 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 HOGA1Q86XE5 327 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 LYG1Q8N1E2 194 aa11.68□□□□□ -0.54
USP11-207ENST00000478596 GAPTQ8N292 157 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms