RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	TMEM100	Q9NV29	134 aa		5.1	□□□□□ -1.59
LRCH3-215	ENST00000476664	VNN3	Q9NY84	501 aa		5.1	□□□□□ -1.59
LRCH3-215	ENST00000476664		A0A0G2JN53	185 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664		A0A0J9YXV3	536 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	CIB4	A0PJX0	185 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	PEX7	O00628	323 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	RP2	O75695	350 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	GATB	O75879	557 aa	Known RBP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	TNNC2	P02585	160 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	AMBP	P02760	352 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	DTYMK	P23919	212 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	G0S2	P27469	103 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	UBE2N	P61088	152 aa	Known RBP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	ZNF45	Q02386	682 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	INCA1	Q0VD86	236 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	NSDHL	Q15738	373 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	C4orf26	Q17RF5	130 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	STRADA	Q7RTN6	431 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	OR13G1	Q8NGZ3	307 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	RERG	Q96A58	199 aa	Predicted RBP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	TMA16	Q96EY4	203 aa	Known RBP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	SMARCD1	Q96GM5	515 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	SIGLEC12	Q96PQ1	595 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	METTL26	Q96S19	204 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	MMACHC	Q9Y4U1	282 aa		5.09	□□□□□ -1.59
LRCH3-215	ENST00000476664	EPM2A	B3EWF7	344 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SHISA9	B4DS77	424 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	GALR3	O60755	368 aa	Predicted RBP	5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SERF1A	O75920	110 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SERPINA1	P01009	418 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	IGKV1D-16	P01601	117 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	OR3A4P	P47883	348 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	NCBP2	P52298	156 aa	Known RBP eCLIP	5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	ZNF138	P52744	262 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SYNJ2BP	P57105	145 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	PAX8	Q06710	450 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	KRTAP1-1	Q07627	177 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SAXO2	Q658L1	398 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	KCTD16	Q68DU8	428 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	FAM131A	Q6UXB0	335 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	FAM231D	Q6ZW35	169 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	GPR26	Q8NDV2	337 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	SGMS2	Q8NHU3	365 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	TEX47	Q8TBZ9	253 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	DTD1	Q8TEA8	209 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	CASTOR1	Q8WTX7	329 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	CEP19	Q96LK0	163 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	PRRT1	Q99946	306 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	MS4A6A	Q9H2W1	248 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	ASB7	Q9H672	318 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	LHX9	Q9NQ69	397 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	FARSA	Q9Y285	508 aa	Known RBP	5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	ARL5A	Q9Y689	179 aa		5.08	□□□□□ -1.6
LRCH3-215	ENST00000476664	DOCK10	Q96BY6	2186 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	IGHV1-69D	A0A0B4J2H0	117 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	TMEM238	C9JI98	176 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664		H0YJX3	145 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	PSPHP1	O15172	72 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	REM1	O75628	298 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	SLPI	P03973	132 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	FABP3	P05413	133 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	ZNF17	P17021	662 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	RCVRN	P35243	200 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	MAGEA12	P43365	314 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	ACOT2	P49753	483 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	HERVK_113	P61574	105 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	RAN	P62826	216 aa	Known RBP	5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	HBG1	P69891	147 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	HBG2	P69892	147 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	PRDX1	Q06830	199 aa	Known RBP	5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	RGN	Q15493	299 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	GID4	Q8IVV7	300 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	GATD1	Q8NB37	220 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	ZNF680	Q8NEM1	530 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	OR10G6	Q8NH81	332 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	HAVCR2	Q8TDQ0	301 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	OR10C1	Q96KK4	312 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	OPRPN	Q99935	248 aa	Predicted RBP	5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	SLC25A2	Q9BXI2	301 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	TPK1	Q9H3S4	243 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	METTL17	Q9H7H0	456 aa	Predicted RBP	5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	ZNF581	Q9P0T4	197 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	ABCA1	O95477	2261 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	CMYA5	Q8N3K9	4069 aa		5.07	□□□□□ -1.6
LRCH3-215	ENST00000476664	RBFOX3	A6NFN3	312 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	METTL15	A6NJ78	407 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	KPNA3	O00505	521 aa	Predicted RBP	5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	NDUFS5	O43920	106 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	IGHV3-23	P01764	117 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	BGLAP	P02818	100 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	AKR1C4	P17516	323 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	GDF1	P27539	372 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	RPL12	P30050	165 aa	Known RBP	5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	PYCR1	P32322	319 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	TALDO1	P37837	337 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	CDKN2B	P42772	138 aa		5.06	□□□□□ -1.6
LRCH3-215	ENST00000476664	CYB561	P49447	251 aa		5.06	□□□□□ -1.6

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