RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 C1QTNF9P0C862 333 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 CAPZBP47756 277 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 CLDN17P56750 224 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 OR4C12Q96R67 309 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 OR6C1Q96RD1 312 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
HDAC1-206ENST00000476391 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 J3QR06 171 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 DEGS1O15121 323 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 C3orf79P0CE67 100 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 CTSSP25774 331 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 RPS18P62269 152 aaKnown RBP11.8□□□□□ -0.52
HDAC1-206ENST00000476391 HLA-DRB5Q30154 266 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 FAM71F2Q6NXP2 309 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF818PQ6ZRF7 136 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 Q6ZSR3 168 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 HAPLN4Q86UW8 402 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 BMFQ96LC9 184 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 MRPL13Q9BYD1 178 aaKnown RBP11.8□□□□□ -0.52
HDAC1-206ENST00000476391 SOHLH2Q9NX45 425 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 A0A0J9YY10 115 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 C17orf51A8MQB3 221 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 FCN1O00602 326 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 RER1O15258 196 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 SYNGR2O43760 224 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF90Q03938 601 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 MRPL49Q13405 166 aaKnown RBP11.8□□□□□ -0.52
HDAC1-206ENST00000476391 STUMQ69YW2 141 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 VWA1Q6PCB0 445 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 GAPTQ8N292 157 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 WNT10AQ9GZT5 417 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 GNB4Q9HAV0 340 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
HDAC1-206ENST00000476391 E9PLN8 166 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 SIRPB1O00241 398 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 HMGB3O15347 200 aaKnown RBP11.79□□□□□ -0.52
HDAC1-206ENST00000476391 IL12BP29460 328 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 LILRA6Q6PI73 481 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR2M3Q8NG83 312 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR10V1Q8NGI7 309 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 PRSS38A1L453 326 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 RBFOX2O43251 390 aaKnown RBP eCLIP11.79□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF324O75467 553 aaPredicted RBP11.79□□□□□ -0.52
HDAC1-206ENST00000476391 TIMP3P35625 211 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 GNB1P62873 340 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 ACSM6Q6P461 480 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR4P4Q8NGL7 312 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR10G9Q8NGN4 311 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 OR10G7Q8NGN6 311 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 TMEM234Q8WY98 164 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 EMC6Q9BV81 110 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 SF3B5Q9BWJ5 86 aaKnown RBP11.79□□□□□ -0.52
HDAC1-206ENST00000476391 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 CLEC1BQ9P126 229 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 PIGLQ9Y2B2 252 aa11.79□□□□□ -0.52
HDAC1-206ENST00000476391 TRAV9-2A0A087WT02 112 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 A0A1W2PS18 150 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 NTSR1P30989 418 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 CCR5P51681 352 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 OR1D5P58170 312 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 MLF1P58340 268 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 PSG4Q00888 419 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 PRR22Q8IZ63 422 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 OR4S2Q8NH73 311 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 A0A0G2JRQ6 117 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 UBE2L5PA0A1B0GUS4 154 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 B4DGG1 531 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 ANGPTL7O43827 346 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 TNFSF15O95150 251 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 GFRA1P56159 465 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 CLDN15P56746 228 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 RHOBP62745 196 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 PET117Q6UWS5 81 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 Q6ZS49 121 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 BORCS7Q96B45 105 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 KCNIP2Q9NS61 270 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 DEC1Q9P2X7 70 aa11.78□□□□□ -0.52
HDAC1-206ENST00000476391 SNURFLB1AK76 121 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 H0YIG0 161 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 MT-ND6P03923 174 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 DRD1P21728 446 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 CTGFP29279 349 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 ZNF83P51522 516 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 RIPPLY3P57055 190 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 CLRN1P58418 232 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 Q6ZPA2 131 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 DEFB125Q8N687 156 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 ADIPOR1Q96A54 375 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 SFXN3Q9BWM7 321 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 IL36GQ9NZH8 169 aa11.77□□□□□ -0.52
HDAC1-206ENST00000476391 C9orf172C9J069 976 aa11.77□□□□□ -0.53
HDAC1-206ENST00000476391 PDCD6O75340 191 aa11.77□□□□□ -0.53
HDAC1-206ENST00000476391 NDUFB4O95168 129 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms