RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 ZNF134P52741 427 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 CLDN12P56749 244 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 HES5Q5TA89 166 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 ZNF773Q6PK81 442 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 C5orf56Q8N8D9 126 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 CHPT1Q8WUD6 406 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 EAF1Q96JC9 268 aaPredicted RBP13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 CITED2Q99967 270 aaPredicted RBP13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 STUB1Q9UNE7 303 aa13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 RRP15Q9Y3B9 282 aaKnown RBP13.94□□□□□ -0.18
SCARNA2-201ENST00000458748 A0A0A6YYD4 124 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 SLC31A2O15432 143 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 ZBTB25P24278 435 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 PPP1CCP36873 323 aaKnown RBP13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 SLC35B1P78383 322 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 C22orf42Q6IC83 251 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 ZNF880Q6PDB4 577 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 EDARADDQ8WWZ3 215 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 RASL11BQ9BPW5 248 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 CMSS1Q9BQ75 279 aaKnown RBP13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 GON7Q9BXV9 100 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 LIN7CQ9NUP9 197 aaKnown RBP13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 PIPOXQ9P0Z9 390 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 SSR3Q9UNL2 185 aa13.93□□□□□ -0.18
SCARNA2-201ENST00000458748 IGHV3-72A0A0B4J1Y9 119 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 TMEM272A0A1B0GTI8 110 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 TCRBV4S1A1TA0A5B7 111 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 SERPINE3A8MV23 424 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 HSPA12AO43301 675 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 RAB6AP20340 208 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 FGF9P31371 208 aaPredicted RBP13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 ARL6IP1Q15041 203 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 SLC35E3Q7Z769 313 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 TPRA1Q86W33 373 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 PTX4Q96A99 478 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 R3HDM4Q96D70 268 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 RAB3CQ96E17 227 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 ARHGAP5-AS1Q96IT6 56 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 S1PR3Q99500 378 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 CENPOQ9BU64 300 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 PECRQ9BY49 303 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 TSSC4Q9Y5U2 329 aaPredicted RBP13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 CMYA5Q8N3K9 4069 aa13.92□□□□□ -0.18
SCARNA2-201ENST00000458748 PSMB11A5LHX3 300 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 LDLRAD4O15165 306 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 CD3GP09693 182 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 CD83Q01151 205 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 GNMTQ14749 295 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 FBLN7Q53RD9 439 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 FAM53AQ6NSI3 398 aaPredicted RBP13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 FAM71F2Q6NXP2 309 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 C1QL4Q86Z23 238 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 COMMD1Q8N668 190 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 SLC23A1Q9UHI7 598 aa13.91□□□□□ -0.18
SCARNA2-201ENST00000458748 SH2D7A6NKC9 451 aaPredicted RBP13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 FOXI3A8MTJ6 420 aaPredicted RBP13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 ITGB1BP1O14713 200 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 RAB29O14966 203 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 IGHG2P01859 326 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 PF4V1P10720 104 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 OR10A3P58181 314 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 LSAMPQ13449 338 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 KCTD21Q4G0X4 260 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 Q8N6K4 173 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 Q9N2K0 584 aa13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
SCARNA2-201ENST00000458748 NOTOA8MTQ0 251 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 AP4M1O00189 453 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 SCGNO76038 276 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 CEACAM6P40199 344 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 SERPINB10P48595 397 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 TMEM50BP56557 158 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 KIR2DS1Q14954 304 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 KHDC1LQ5JSQ8 128 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 HIST2H2BDQ6DRA6 164 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 ZNF833PQ6ZTB9 187 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 OR10R2Q8NGX6 335 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 KCTD7Q96MP8 289 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 ABCG5Q9H222 651 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 VCX3AQ9NNX9 186 aa13.89□□□□□ -0.19
SCARNA2-201ENST00000458748 ADARB2-AS1A8MUL3 147 aa13.88□□□□□ -0.19
SCARNA2-201ENST00000458748 TRDCB7Z8K6 153 aa13.88□□□□□ -0.19
SCARNA2-201ENST00000458748 TALDO1P37837 337 aa13.88□□□□□ -0.19
SCARNA2-201ENST00000458748 PLAC9Q5JTB6 97 aa13.88□□□□□ -0.19
SCARNA2-201ENST00000458748 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
SCARNA2-201ENST00000458748 SAA2-SAA4A0A096LPE2 208 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 A0A1W2PRX2 142 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 SHISA3A0PJX4 238 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 SAA2P0DJI9 122 aaPredicted RBP13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 SLC6A1P30531 599 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 MC5RP33032 325 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 SOX6P35712 828 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 GPR12P47775 334 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 ARFRP1Q13795 201 aa13.87□□□□□ -0.19
SCARNA2-201ENST00000458748 MMDQ15546 238 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms