RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 KLF3P57682 345 aaPredicted RBP14.28□□□□□ -0.12
PTPRC-206ENST00000413409 PRAMEF6Q5VXH4 476 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 FAM90A1Q86YD7 464 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 OR11L1Q8NGX0 322 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 STOML3Q8TAV4 291 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 AQP10Q96PS8 301 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 ZFP57Q9NU63 452 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 FZR1Q9UM11 496 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 TMED3Q9Y3Q3 217 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 DYSFO75923 2080 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 C3orf85A0A1B0GTC6 90 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 LEUTXA8MZ59 168 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 CFHR2P36980 270 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 PAX5Q02548 391 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 RAB32Q13637 225 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM249Q2WGJ8 235 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 BEX5Q5H9J7 111 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 SLC35E4Q6ICL7 350 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 OR10J5Q8NHC4 309 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 LILRB1Q8NHL6 650 aaPredicted RBP14.27□□□□□ -0.12
PTPRC-206ENST00000413409 GLYATL2Q8WU03 294 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 SECTM1Q8WVN6 248 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM222Q9H0R3 208 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 MSL2Q9HCI7 577 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 OR2W1Q9Y3N9 320 aa14.27□□□□□ -0.12
PTPRC-206ENST00000413409 IGKV1D-13A0A0B4J2D9 117 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 IGKV1-13P0DP09 117 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 EGR1P18146 543 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 RCC1P18754 421 aaPredicted RBP14.26□□□□□ -0.13
PTPRC-206ENST00000413409 S100GP29377 79 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 SMCO1Q147U7 214 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 MSMPQ1L6U9 139 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 CMTM1Q8IZ96 169 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 NUP37Q8NFH4 326 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 IL22RA2Q969J5 263 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 TMEM56Q96MV1 263 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 SHARPINQ9H0F6 387 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 OR5AC2Q9NZP5 309 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 TMEM56-RWDD3S4R434 201 aa14.26□□□□□ -0.13
PTPRC-206ENST00000413409 IGHV4-30-2A0A087WSY4 118 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 H0Y980 276 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 SPDEFO95238 335 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 NMBP08949 121 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 DANCRP0C864 163 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 RRASP10301 218 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 S100A10P60903 97 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 ALKAL2Q6UX46 152 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 ZNF818PQ6ZRF7 136 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 ZNF826PQ6ZT77 177 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 IL17RELQ6ZVW7 336 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 TBC1D26Q86UD7 250 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 COMMD7Q86VX2 200 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 BVESQ8NE79 360 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 OR1S1Q8NH92 325 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 PLPPR2Q96GM1 343 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 TP53RKQ96S44 253 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 SLC25A32Q9H2D1 315 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 ESRP2Q9H6T0 727 aaKnown RBP14.25□□□□□ -0.13
PTPRC-206ENST00000413409 TRAPPC2LQ9UL33 140 aa14.25□□□□□ -0.13
PTPRC-206ENST00000413409 MALRD1Q5VYJ5 2156 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 A0A1B0GW55 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 ZSCAN5BA6NJL1 495 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 SRRM5B3KS81 715 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 ATP6V1G2-DDX39BF2Z307 99 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 C3orf80F5H4A9 247 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.24□□□□□ -0.13
PTPRC-206ENST00000413409 WNT9BO14905 357 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DEDDO75618 318 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 CDS2O95674 445 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L2P0CJ85 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L3P0CJ86 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L4P0CJ87 422 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L5P0CJ88 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L6P0CJ89 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4L7P0CJ90 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 UCP1P25874 307 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 CD40P25942 277 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 LUMP51884 338 aaPredicted RBP14.24□□□□□ -0.13
PTPRC-206ENST00000413409 SP6Q3SY56 376 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 C6orf183Q5T699 404 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 OR2Z1Q8NG97 314 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 OR10V1Q8NGI7 309 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 LHFPL5Q8TAF8 219 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 LRRC29Q8WV35 223 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 RRNAD1Q96FB5 475 aaKnown RBP14.24□□□□□ -0.13
PTPRC-206ENST00000413409 ABHD14BQ96IU4 210 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 MEGF10Q96KG7 1140 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 SPIN2AQ99865 258 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 SPIN2BQ9BPZ2 258 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 ZNF471Q9BX82 626 aaPredicted RBP14.24□□□□□ -0.13
PTPRC-206ENST00000413409 GSKIPQ9P0R6 139 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 DUX4Q9UBX2 424 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 OR14J1Q9UGF5 321 aa14.24□□□□□ -0.13
PTPRC-206ENST00000413409 hCG_1807616A0A1W2PRN6 198 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 F5H0A9 414 aaPredicted RBP14.23□□□□□ -0.13
PTPRC-206ENST00000413409 PSPNO60542 156 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 RLN2P04090 185 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 SRD5A1P18405 259 aa14.23□□□□□ -0.13
PTPRC-206ENST00000413409 GATA4P43694 442 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms