RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 PRDX4Q13162 271 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 TRA2AQ13595 282 aaKnown RBP eCLIP7.6□□□□□ -1.193e-8■■■□□ 18.5
RTN4-206ENST00000394611 TMEM187Q14656 261 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 ZNF721Q8TF20 911 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 KLF2Q9Y5W3 355 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 A0A1B0GTQ1 180 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 BCAT2O15382 392 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 IGHV3-48P01763 117 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 FGF5P12034 268 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 IGFBP3P17936 291 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 MDH2P40926 338 aaKnown RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 FABP6P51161 128 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 DCDP81605 110 aaKnown RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 OR10P1Q8NGE3 313 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 RNF166Q96A37 237 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 STARD4Q96DR4 205 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 OR4C12Q96R67 309 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 KCNK17Q96T54 332 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 CTDSP1Q9GZU7 261 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 PARLQ9H300 379 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 LIME1Q9H400 295 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 SRD5A3Q9H8P0 318 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 TMEM9BQ9NQ34 198 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 SEMA5BQ9P283 1151 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 MYOTQ9UBF9 498 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 DEGS1O15121 323 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 SYNGR2O43760 224 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 PDCD6O75340 191 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 CYB5R3P00387 301 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 P04436 131 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 DCAF7P61962 342 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 HOXA4Q00056 320 aaPredicted RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 GCSAMLQ5JQS6 135 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 PHYHD1Q5SRE7 291 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 RCC1LQ96I51 464 aaKnown RBP7.6□□□□□ -1.19
RTN4-206ENST00000394611 STARD10Q9Y365 291 aa7.6□□□□□ -1.19
RTN4-206ENST00000394611 IGKV1D-13A0A0B4J2D9 117 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 IFITM10A6NMD0 228 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 APELAP0DMC3 54 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 IGKV1-13P0DP09 117 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 HIKESHIQ53FT3 197 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 RNASEKQ6P5S7 137 aaKnown RBP7.59□□□□□ -1.19
RTN4-206ENST00000394611 TEX38Q6PEX7 206 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ABHD3Q8WU67 409 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ZNF586Q9NXT0 402 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ZNF106Q9H2Y7 1883 aaKnown RBP7.59□□□□□ -1.19
RTN4-206ENST00000394611 A0A1W2PPC4 97 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 A0A1W2PRD5 423 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 A0A1W2PRF3 423 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 A0A1W2PRM7 423 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 BLACEA4D250 179 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 C9J4A7 227 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ZNF253O75346 499 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 IGHV2-5P01817 119 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 CD1AP06126 327 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 GZMBP10144 247 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 CEACAM6P40199 344 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 LINC00205P59089 165 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 COTL1Q14019 142 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 WDR74Q6RFH5 385 aaPredicted RBP7.59□□□□□ -1.19
RTN4-206ENST00000394611 CPT1CQ8TCG5 803 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 OXGR1Q96P68 337 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ENY2Q9NPA8 101 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 KCNIP1Q9NZI2 227 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 OR1A1Q9P1Q5 309 aa7.59□□□□□ -1.19
RTN4-206ENST00000394611 ANKRD30BLA7E2S9 258 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 C10orf142B7Z368 130 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 HPRT1P00492 218 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 IRF2P14316 349 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 TMEM11P17152 192 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 CCR5P51681 352 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 MMDQ15546 238 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 ISXQ2M1V0 245 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 DEFB108BQ8NET1 73 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 DERL1Q9BUN8 251 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 SNHG12Q9BXW3 62 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 NAT8Q9UHE5 227 aa7.59□□□□□ -1.2
RTN4-206ENST00000394611 TRDCB7Z8K6 153 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 DLL1O00548 723 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 C1QTNF9P0C862 333 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 VDAC1P21796 283 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 MEF2BQ02080 365 aaPredicted RBP7.58□□□□□ -1.2
RTN4-206ENST00000394611 H2BFWTQ7Z2G1 175 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 C1QL4Q86Z23 238 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 VKORC1L1Q8N0U8 176 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 PP6455Q8WZ26 134 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 MVB12AQ96EY5 273 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 NDUFAF3Q9BU61 184 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 VAX2Q9UIW0 290 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 NOSIPQ9Y314 301 aaKnown RBP7.58□□□□□ -1.2
RTN4-206ENST00000394611 TNCP24821 2201 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 ZGRF1Q86YA3 2104 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 A8MXE2 369 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 ARG2P78540 354 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 TMEM183AQ8IXX5 376 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 HSPB2A8KAH6 182 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 SYNGR1O43759 233 aa7.58□□□□□ -1.2
RTN4-206ENST00000394611 HSBP1O75506 76 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms