RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TCTEX1D1Q8N7M0 179 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 LRRC29Q8WV35 223 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 NINJ1Q92982 152 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 LYRM2Q9NU23 88 aaPredicted RBP8.8□□□□□ -1
POLR2J3-201ENST00000379340 ELOVL5Q9NYP7 299 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 ZDHHC8Q9ULC8 765 aa8.8□□□□□ -1
POLR2J3-201ENST00000379340 SPENQ96T58 3664 aaKnown RBP8.8□□□□□ -1
POLR2J3-201ENST00000379340 RP1L1Q8IWN7 2480 aaPredicted RBP8.8□□□□□ -1
POLR2J3-201ENST00000379340 A8MXE2 369 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 WNT9BO14905 357 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 TNFSF12O43508 249 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 PITX3O75364 302 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 UQCRFS1P47985 274 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 TDGF1P3P51864 188 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 SELENOVP59797 346 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 EWSR1Q01844 656 aaKnown RBP eCLIP8.79□□□□□ -1
POLR2J3-201ENST00000379340 COL10A1Q03692 680 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 SWI5Q1ZZU3 235 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 SPAG16Q8N0X2 631 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 COMMD1Q8N668 190 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 ZNF645Q8N7E2 425 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 OR2Z1Q8NG97 314 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 ERGIC1Q969X5 290 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 ABHD17AQ96GS6 310 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 UFSP2Q9NUQ7 469 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 KCNS2Q9ULS6 477 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 FZR1Q9UM11 496 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 STRAPQ9Y3F4 350 aaKnown RBP8.79□□□□□ -1
POLR2J3-201ENST00000379340 POLQO75417 2590 aa8.79□□□□□ -1
POLR2J3-201ENST00000379340 ZSCAN5BA6NJL1 495 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 C12orf77C9JDV5 145 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 C3orf80F5H4A9 247 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 MED6O75586 246 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 ATG12O94817 140 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 IGLV2-14P01704 120 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 ADH4P08319 380 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 PSG2P11465 335 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 GATA4P43694 442 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 GABRA2P47869 451 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 CEBPDP49716 269 aaPredicted RBP8.78□□□□□ -1
POLR2J3-201ENST00000379340 F2RL1P55085 397 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 POLR2GP62487 172 aaKnown RBP eCLIP8.78□□□□□ -1
POLR2J3-201ENST00000379340 CATR1Q13166 79 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 MST1LQ2TV78 715 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 KRBOX4Q5JUW0 171 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 PXDC1Q5TGL8 231 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 PRR18Q8N4B5 295 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 RPRMLQ8N4K4 120 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 BPIFCQ8NFQ6 507 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 OR51H1Q8NH63 302 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 RNASE11Q8TAA1 199 aaKnown RBP8.78□□□□□ -1
POLR2J3-201ENST00000379340 COQ2Q96H96 371 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 SNX22Q96L94 193 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 RAB40CQ96S21 281 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 SMIM3Q9BZL3 60 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 NCOR1P1Q9H4R4 102 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 RAB9BQ9NP90 201 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 TP53TG5Q9Y2B4 290 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 FBN2P35556 2912 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 CHD3Q12873 2000 aaKnown RBP8.78□□□□□ -1
POLR2J3-201ENST00000379340 TRAV39A0A0B4J263 110 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 IGHV3-64DA0A0J9YX35 117 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 FAM90A26D6RGX4 464 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 SPINT2O43291 252 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 SSSCA1O60232 199 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 HBZP02008 142 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 OR8U9P0C7N5 309 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 SPP1P10451 314 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 COL8A1P27658 744 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 PRDX2P32119 198 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 CAV2P51636 162 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 RPL23AP62750 156 aaKnown RBP8.78□□□□□ -1
POLR2J3-201ENST00000379340 HTD2P86397 168 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 ZNF787Q6DD87 383 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 BTNL8Q6UX41 500 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 DRAM1Q8N682 238 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 TMEM252Q8N6L7 170 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 NUP37Q8NFH4 326 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 OR8U1Q8NH10 309 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 OR1L1Q8NH94 360 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 GPR146Q96CH1 333 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 MEGF10Q96KG7 1140 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 COA4Q9NYJ1 87 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 LUZP4Q9P127 313 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 DUSP13Q9UII6 198 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 PPP1R3CQ9UQK1 317 aa8.78□□□□□ -1
POLR2J3-201ENST00000379340 CSMD1Q96PZ7 3565 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 IGSF23A1L1A6 192 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 A1L4Q6 167 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 TMEM218A2RU14 115 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 FAM24AA6NFZ4 105 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 TRIM77I1YAP6 450 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 MGST3O14880 152 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 FBXO24O75426 580 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 SCO1O75880 301 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 APOC3P02656 99 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 AKR1C2P52895 323 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 AESQ08117 197 aa8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 CXorf66Q5JRM2 361 aaPredicted RBP8.77□□□□□ -1.01
POLR2J3-201ENST00000379340 ZNF66Q6ZN08 573 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms