RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SPIN2AQ99865 258 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 SPIN2BQ9BPZ2 258 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 PARP12Q9H0J9 701 aaKnown RBP15.59■□□□□ 0.09
HOXA9-201ENST00000343483 TMEM231Q9H6L2 316 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 KCNS2Q9ULS6 477 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 C12orf77C9JDV5 145 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.59■□□□□ 0.09
HOXA9-201ENST00000343483 ADCYAP1P18509 176 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 PRDX2P32119 198 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 KRBOX4Q5JUW0 171 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 OR51H1Q8NH63 302 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 OR1L1Q8NH94 360 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 WFDC1Q9HC57 220 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 SPTA1P02549 2419 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 RELNP78509 3460 aa15.59■□□□□ 0.09
HOXA9-201ENST00000343483 IGHV3OR15-7A0A075B7D8 119 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 TRGV8A0A0C4DH27 118 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 PSG2P11465 335 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 PTAFRP25105 342 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 NKX2-1P43699 371 aaPredicted RBP15.58■□□□□ 0.09
HOXA9-201ENST00000343483 GLIPR1P48060 266 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 GCSAMQ8N6F7 178 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 OR10Z1Q8NGY1 313 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 LILRB1Q8NHL6 650 aaPredicted RBP15.58■□□□□ 0.09
HOXA9-201ENST00000343483 MRGPRDQ8TDS7 321 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 GALMQ96C23 342 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 ARV1Q9H2C2 271 aa15.58■□□□□ 0.09
HOXA9-201ENST00000343483 MEX3AA1L020 520 aaKnown RBP15.58■□□□□ 0.08
HOXA9-201ENST00000343483 OOEPA6NGQ2 149 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 F8W036 122 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 H0Y980 276 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 DNASE2O00115 360 aaPredicted RBP15.58■□□□□ 0.08
HOXA9-201ENST00000343483 ADAM20O43506 726 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 HEXAP06865 529 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 THBDP07204 575 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 OR8U9P0C7N5 309 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 F2RP25116 425 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 UCP1P25874 307 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 IL2RGP31785 369 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 NHLH2Q02577 135 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 EDDM3AQ14507 147 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 SWI5Q1ZZU3 235 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 NUP37Q8NFH4 326 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 OR8U1Q8NH10 309 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 PARP11Q9NR21 331 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 PPP1R3CQ9UQK1 317 aa15.58■□□□□ 0.08
HOXA9-201ENST00000343483 IGKV1D-17A0A075B6S4 117 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 DUXBA0A1W2PPF3 345 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 CFHR2P36980 270 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 CAV2P51636 162 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 BSPH1Q075Z2 132 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 BTNL8Q6UX41 500 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 Q6ZRG5 221 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 SVBPQ8N300 66 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 VKORC1Q9BQB6 163 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 FAM212BQ9NTI7 297 aaPredicted RBP15.57■□□□□ 0.08
HOXA9-201ENST00000343483 FAM96BQ9Y3D0 163 aa15.57■□□□□ 0.08
HOXA9-201ENST00000343483 DPRXA6NFQ7 191 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 IGLV2-14P01704 120 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 HBZP02008 142 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 POLR2GP62487 172 aaKnown RBP eCLIP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 TNFAIP6P98066 277 aaPredicted RBP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 OR5D13Q8NGL4 314 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 UQCC1Q9NVA1 299 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 COL6A6A6NMZ7 2263 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 ATXN7O15265 892 aaPredicted RBP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 IGHV1-46P01743 117 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 MUC1P15941 1255 aaPredicted RBP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 PVALBP20472 110 aaPredicted RBP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 F2RL1P55085 397 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 EWSR1Q01844 656 aaKnown RBP eCLIP15.56■□□□□ 0.08
HOXA9-201ENST00000343483 GUCA2BQ16661 112 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 FAM90A1Q86YD7 464 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 GINS3Q9BRX5 216 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 C11orf1Q9H5F2 150 aa15.56■□□□□ 0.08
HOXA9-201ENST00000343483 FAM74A7A6NL05 159 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 SERPINE2P07093 398 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 SEC11BP0C7V7 166 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 VDAC1P21796 283 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 SSTR5P35346 364 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 FAM74A3Q4VXF1 159 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 NMSQ5H8A3 153 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 C10orf91Q5T1B1 145 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 PUSL1Q8N0Z8 303 aaKnown RBP15.55■□□□□ 0.08
HOXA9-201ENST00000343483 OR2C3Q8N628 320 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 OR52L2PQ8NGH6 319 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 OR13A1Q8NGR1 328 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 CARHSP1Q9Y2V2 147 aaKnown RBP15.55■□□□□ 0.08
HOXA9-201ENST00000343483 FAM24AA6NFZ4 105 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 AGPAT2O15120 278 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 SSSCA1O60232 199 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 ZNF737O75373 536 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 CASP6P55212 293 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 CXorf66Q5JRM2 361 aaPredicted RBP15.55■□□□□ 0.08
HOXA9-201ENST00000343483 FAM53AQ6NSI3 398 aaPredicted RBP15.55■□□□□ 0.08
HOXA9-201ENST00000343483 NINJ1Q92982 152 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 IL22RA2Q969J5 263 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 MAGT1Q9H0U3 335 aa15.55■□□□□ 0.08
HOXA9-201ENST00000343483 ESRP2Q9H6T0 727 aaKnown RBP15.55■□□□□ 0.08
HOXA9-201ENST00000343483 CLEC18AA5D8T8 446 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 210.1 ms