RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 GHRHP01286 108 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 FCARP24071 287 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 OR10D3Q8NH80 312 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 RAB24Q969Q5 203 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 TSPAN2O60636 221 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 ZP3P21754 424 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 AANATQ16613 207 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 PABPC1L2AQ5JQF8 200 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 OR2C3Q8N628 320 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 TSPAN32Q96QS1 320 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 A0A1B0GV72 72 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 ZNF880Q6PDB4 577 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 OR10AG1Q8NH19 301 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 WDFY2Q96P53 400 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 LAMB1P07942 1786 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 NRXN3Q9Y4C0 1643 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 CTF1Q16619 201 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 NUBPLQ8TB37 319 aa10.6□□□□□ -0.71
PCF11-201ENST00000298281 SLC25A10Q9UBX3 287 aaPredicted RBP10.6□□□□□ -0.71
PCF11-201ENST00000298281 CACNA1EQ15878 2313 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 C9JCJ5 164 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 EDIL3O43854 480 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 OR6X1Q8NH79 312 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 KIR2DL4Q99706 377 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 THY1P04216 161 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 TSPOP30536 169 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 ERVFRD-1P60508 538 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 SKP2Q13309 424 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 ANKRD37Q7Z713 158 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 ZNF275Q9NSD4 429 aaPredicted RBP10.59□□□□□ -0.71
PCF11-201ENST00000298281 NRAPQ86VF7 1730 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 MBPP02686 304 aaPredicted RBP10.59□□□□□ -0.71
PCF11-201ENST00000298281 BGLAPP02818 100 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 DHRS2Q13268 280 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 NRN1LQ496H8 165 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 TMEM170BQ5T4T1 132 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 NSUN5P2Q63ZY6 315 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 TMEM204Q9BSN7 226 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 TNFRSF18Q9Y5U5 241 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 KCNE3Q9Y6H6 103 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 COL6A6A6NMZ7 2263 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 SF3B5Q9BWJ5 86 aaKnown RBP10.59□□□□□ -0.71
PCF11-201ENST00000298281 MRPL16Q9NX20 251 aaKnown RBP10.59□□□□□ -0.71
PCF11-201ENST00000298281 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 CACNA1GO43497 2377 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 B4DEV8 164 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 CSF2RBP32927 897 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 GUCD1Q96NT3 240 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 PGA4P0DJD7 388 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 PGA5P0DJD9 388 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 PMELP40967 661 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 FAM27D1Q5T7N8 215 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 TP53I13Q8NBR0 393 aaPredicted RBP10.59□□□□□ -0.71
PCF11-201ENST00000298281 OR1P1Q8NH06 330 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 LPAR3Q9UBY5 353 aa10.59□□□□□ -0.71
PCF11-201ENST00000298281 ANKRD36A6QL64 1941 aa10.58□□□□□ -0.71
PCF11-201ENST00000298281 IGHV1OR21-1A0A087WYE8 117 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 RER1O15258 196 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 TNFSF10P50591 281 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 LSM6P62312 80 aaKnown RBP10.58□□□□□ -0.72
PCF11-201ENST00000298281 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 SLC25A53Q5H9E4 307 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 NTMQ9P121 344 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 TMEM272A0A1B0GTI8 110 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 M0QZK8 103 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 MBTPS2O43462 519 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 TNFSF14O43557 240 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
PCF11-201ENST00000298281 PRICKLE4Q2TBC4 344 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 FHL5Q5TD97 284 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 PAXXQ9BUH6 204 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 MIOXQ9UGB7 285 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 ZFPL1O95159 310 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 ZNF774Q6NX45 483 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 GUSBP11Q6P575 273 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 WDR34Q96EX3 536 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 CXorf1O96002 111 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 PRR35P0CG20 571 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 C9orf170A2RU37 121 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 PROB1E7EW31 1015 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 ADRA2AP08913 450 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 GPR6P46095 362 aaPredicted RBP10.58□□□□□ -0.72
PCF11-201ENST00000298281 ATP5J2P56134 94 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 PRSS53Q2L4Q9 553 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 MBNL2Q5VZF2 373 aaKnown RBP10.58□□□□□ -0.72
PCF11-201ENST00000298281 DUX3Q96PT4 197 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 hCG_38984A0A1B0GV85 526 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 ITGBL1O95965 494 aaPredicted RBP10.58□□□□□ -0.72
PCF11-201ENST00000298281 GZMHP20718 246 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 TMEM255AQ5JRV8 349 aa10.58□□□□□ -0.72
PCF11-201ENST00000298281 SF3B6Q9Y3B4 125 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms