RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 IL17RELQ6ZVW7 336 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 CENPSQ8N2Z9 138 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 C11orf42Q8N5U0 333 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 GIMAP1Q8WWP7 306 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 LINC00574Q9H8X3 128 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 OR1A1Q9P1Q5 309 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 COPZ2Q9P299 210 aa16.93■□□□□ 0.3
RTCA-201ENST00000260563 SONP18583 2426 aaKnown RBP16.93■□□□□ 0.3
RTCA-201ENST00000260563 INAFM1C9JVW0 142 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 F2RL2O00254 374 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 HSPA12AO43301 675 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 IGHV1-8P0DP01 117 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 NFYAP23511 347 aaPredicted RBP16.92■□□□□ 0.3
RTCA-201ENST00000260563 PRTN3P24158 256 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 RBMS2Q15434 407 aaKnown RBP16.92■□□□□ 0.3
RTCA-201ENST00000260563 PRAMEF5Q5TYX0 476 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 CCBE1Q6UXH8 406 aaPredicted RBP16.92■□□□□ 0.3
RTCA-201ENST00000260563 LHFPL1Q86WI0 220 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 OR13C8Q8NGS7 320 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 TERB2Q8NHR7 220 aa16.92■□□□□ 0.3
RTCA-201ENST00000260563 UNKLQ9H9P5 680 aaKnown RBP16.92■□□□□ 0.3
RTCA-201ENST00000260563 NDUFB6O95139 128 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 TCRBP04435 133 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 HOXB4P17483 251 aaPredicted RBP16.91■□□□□ 0.3
RTCA-201ENST00000260563 OMGP23515 440 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 FPR2P25090 351 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 DLX1P56177 255 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 LTC4SQ16873 150 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 NCR3LG1Q68D85 454 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 HEPN1Q6WQI6 88 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 H1FOOQ8IZA3 346 aaPredicted RBP16.91■□□□□ 0.3
RTCA-201ENST00000260563 OR52L2PQ8NGH6 319 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 NANPQ8TBE9 248 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 LHX4Q969G2 390 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 MMP28Q9H239 520 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 OR2S2Q9NQN1 319 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 IDI2-AS1Q9NZ38 188 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 ZNF69Q9UC07 566 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 JPT1Q9UK76 154 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 CDC42EP3Q9UKI2 254 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 SESN1Q9Y6P5 492 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 NSD1Q96L73 2696 aaPredicted RBP16.91■□□□□ 0.3
RTCA-201ENST00000260563 CEACAM6P40199 344 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 GPR157Q5UAW9 335 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 AADACL3Q5VUY0 350 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 PLET1Q6UQ28 207 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 MRGPRFQ96AM1 343 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 SLC25A21Q9BQT8 299 aaPredicted RBP16.91■□□□□ 0.3
RTCA-201ENST00000260563 NUBP2Q9Y5Y2 271 aa16.91■□□□□ 0.3
RTCA-201ENST00000260563 IGHV3-43A0A0B4J1X8 118 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 OR5H14A6NHG9 310 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 TUSC2O75896 110 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 PPYP01298 95 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 IGHV3-43DP0DP04 118 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 AADACP22760 399 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 SRP14P37108 136 aaKnown RBP16.9■□□□□ 0.3
RTCA-201ENST00000260563 PRB3Q04118 309 aaPredicted RBP16.9■□□□□ 0.3
RTCA-201ENST00000260563 KLRD1Q13241 179 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 GNMTQ14749 295 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 TMEM30BQ3MIR4 351 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 OR10A7Q8NGE5 316 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 TNFRSF14Q92956 283 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 BEX2Q9BXY8 128 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 TOLLIPQ9H0E2 274 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 RDH8Q9NYR8 311 aa16.9■□□□□ 0.3
RTCA-201ENST00000260563 FAM172BPA6NC97 362 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 MMP23AO75900 390 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 IGHV4-38-2P0DP08 117 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 LOXL3P58215 753 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 HERV-K104P61576 105 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 PDZD9Q8IXQ8 264 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 OR10V1Q8NGI7 309 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 MOB3AQ96BX8 217 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 C20orf85Q9H1P6 137 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 HEXA-AS1Q9H8Q6 139 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 NUDT15Q9NV35 164 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 GNG12Q9UBI6 72 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 OR2W1Q9Y3N9 320 aa16.89■□□□□ 0.29
RTCA-201ENST00000260563 IGHV3OR16-10A0A075B7F0 116 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 CENPVL3A0A0U1RRI6 287 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 RNASEK-C17orf49H0YIS7 233 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 FSHBP01225 129 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 COX7A1P24310 79 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 NFYBP25208 207 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 ECI1P42126 302 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 FXYD4P59646 89 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 KLF17Q5JT82 389 aaPredicted RBP16.88■□□□□ 0.29
RTCA-201ENST00000260563 FAM53AQ6NSI3 398 aaPredicted RBP16.88■□□□□ 0.29
RTCA-201ENST00000260563 OR52M1Q8NGK5 317 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 OR13D1Q8NGV5 346 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 CREB3L1Q96BA8 519 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 SUCNR1Q9BXA5 334 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 FXYD6Q9H0Q3 95 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 TMEM133Q9H2Q1 129 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 GFOD1Q9NXC2 390 aa16.88■□□□□ 0.29
RTCA-201ENST00000260563 TEP1Q99973 2627 aaKnown RBP16.87■□□□□ 0.29
RTCA-201ENST00000260563 ZFHX3Q15911 3703 aa16.87■□□□□ 0.29
RTCA-201ENST00000260563 TRAV6A0A075B6T7 132 aa16.87■□□□□ 0.29
RTCA-201ENST00000260563 YPEL1O60688 119 aa16.87■□□□□ 0.29
RTCA-201ENST00000260563 PPP1CCP36873 323 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms