RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 OR10J5Q8NHC4 309 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 CT45A3Q8NHU0 189 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 EDARADDQ8WWZ3 215 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 AGMATQ9BSE5 352 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 SRRQ9GZT4 340 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 GHITMQ9H3K2 345 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 ZNF69Q9UC07 566 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 SLC23A1Q9UHI7 598 aa11.45□□□□□ -0.58
VPS25-201ENST00000253794 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
VPS25-201ENST00000253794 FAM172BPA6NC97 362 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 OOSP1A8MZH6 123 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 BUB1B-PAK6H3BSN5 160 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 TOR1AO14656 332 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 BET1O15155 118 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 CD74P04233 296 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 ARG1P05089 322 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 FAM157CP0CG43 387 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 CEACAM6P40199 344 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 RAB7AP51149 207 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 ARPC4P59998 168 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 CDK10Q15131 360 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 ACTBL2Q562R1 376 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 VAX1Q5SQQ9 334 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 LDLRAD2Q5SZI1 272 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 RUSC1-AS1Q66K80 236 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 PDZD9Q8IXQ8 264 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 TMEM229BQ8NBD8 167 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 OR2AK2Q8NG84 335 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 OR10V1Q8NGI7 309 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 S100ZQ8WXG8 99 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 LEAP2Q969E1 77 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 TRIM63Q969Q1 353 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 ST6GALNAC6Q969X2 333 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 IFI27L2Q9H2X8 130 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 RDH8Q9NYR8 311 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 TAS2R8Q9NYW2 309 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 DPM3Q9P2X0 92 aa11.44□□□□□ -0.58
VPS25-201ENST00000253794 IGHV3OR16-10A0A075B7F0 116 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 SLC31A2O15432 143 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 HSPA12AO43301 675 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 HTR1DP28221 377 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 LGALS4P56470 323 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 DYRK1AQ13627 763 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 AANATQ16613 207 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 ZNF660Q6AZW8 331 aaPredicted RBP11.43□□□□□ -0.58
VPS25-201ENST00000253794 DHRS11Q6UWP2 260 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 Q8N402 240 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 GIMAP1Q8WWP7 306 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 DEDD2Q8WXF8 326 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 SDHCQ99643 169 aaPredicted RBP11.43□□□□□ -0.58
VPS25-201ENST00000253794 MS4A7Q9GZW8 240 aaPredicted RBP11.43□□□□□ -0.58
VPS25-201ENST00000253794 PARP12Q9H0J9 701 aaKnown RBP11.43□□□□□ -0.58
VPS25-201ENST00000253794 C11orf54Q9H0W9 315 aaPredicted RBP11.43□□□□□ -0.58
VPS25-201ENST00000253794 MEGF9Q9H1U4 602 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 NF1P21359 2839 aa11.43□□□□□ -0.58
VPS25-201ENST00000253794 A0A0U1RQK1 487 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 ANKRD20A5PA0PJZ0 165 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 LEUTXA8MZ59 168 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 ZNF736B4DX44 427 aaPredicted RBP11.42□□□□□ -0.58
VPS25-201ENST00000253794 LANCL1O43813 399 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 FBP1P09467 338 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 CSF1P09603 554 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 OR5H8P0DN80 308 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 HRH1P35367 487 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 CEACAM3P40198 252 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 GNG10P50151 68 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 TAS2R19P59542 299 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 ZNF816Q0VGE8 651 aaPredicted RBP11.42□□□□□ -0.58
VPS25-201ENST00000253794 PYDC2Q56P42 97 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 FAM71F2Q6NXP2 309 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 LDLRAD3Q86YD5 345 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 ODF3L1Q8IXM7 274 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 OR5H2Q8NGV7 314 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 GINS4Q9BRT9 223 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 THAP7Q9BT49 309 aaPredicted RBP11.42□□□□□ -0.58
VPS25-201ENST00000253794 ZNRD1Q9P1U0 126 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 GAB2Q9UQC2 676 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 OR2W1Q9Y3N9 320 aa11.42□□□□□ -0.58
VPS25-201ENST00000253794 ZFHX3Q15911 3703 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 VGLL3A8MV65 326 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 IGHV3-7P01780 117 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 CD3DP04234 171 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 IL3RAP26951 378 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 HLA-DMAP28067 261 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 OR3A3P47888 321 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 DYNLT3P51808 116 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 MSMO1Q15800 293 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
VPS25-201ENST00000253794 TPTE2P1Q5T6R2 138 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 BCL6BQ8N143 479 aaPredicted RBP11.41□□□□□ -0.58
VPS25-201ENST00000253794 ARRDC1Q8N5I2 433 aa11.41□□□□□ -0.58
VPS25-201ENST00000253794 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.41□□□□□ -0.58
VPS25-201ENST00000253794 ZNF48Q96MX3 618 aaPredicted RBP11.41□□□□□ -0.58
VPS25-201ENST00000253794 PIPOXQ9P0Z9 390 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms