RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 UBE2J1Q9Y385 318 aaPredicted RBP15.06■□□□□ 0
VIM-201ENST00000224237 DOPEY1Q5JWR5 2465 aa15.06■□□□□ 0
VIM-201ENST00000224237 MEX3AA1L020 520 aaKnown RBP15.06■□□□□ 0
VIM-201ENST00000224237 F2RL2O00254 374 aa15.06■□□□□ 0
VIM-201ENST00000224237 ARPC5O15511 151 aa15.06■□□□□ 0
VIM-201ENST00000224237 TNFSF12O43508 249 aa15.06■□□□□ 0
VIM-201ENST00000224237 F2RP25116 425 aa15.06■□□□□ 0
VIM-201ENST00000224237 SSTR2P30874 369 aa15.06■□□□□ 0
VIM-201ENST00000224237 GGNBP1Q5YKI7 109 aa15.06■□□□□ 0
VIM-201ENST00000224237 C11orf71Q6IPW1 123 aa15.06■□□□□ 0
VIM-201ENST00000224237 ZNF645Q8N7E2 425 aa15.06■□□□□ 0
VIM-201ENST00000224237 ZBTB34Q8NCN2 500 aa15.06■□□□□ 0
VIM-201ENST00000224237 FAM216AQ8WUB2 273 aa15.06■□□□□ 0
VIM-201ENST00000224237 CALYQ9NYX4 217 aa15.06■□□□□ 0
VIM-201ENST00000224237 SLC25A10Q9UBX3 287 aaPredicted RBP15.06■□□□□ 0
VIM-201ENST00000224237 DCHS2Q6V1P9 2916 aa15.05■□□□□ 0
VIM-201ENST00000224237 NDUFA2O43678 99 aa15.05■□□□□ -0
VIM-201ENST00000224237 MPC2O95563 127 aa15.05■□□□□ -0
VIM-201ENST00000224237 SLC25A4P12235 298 aa15.05■□□□□ -0
VIM-201ENST00000224237 UCP1P25874 307 aa15.05■□□□□ -0
VIM-201ENST00000224237 PPP1CCP36873 323 aaKnown RBP15.05■□□□□ -0
VIM-201ENST00000224237 OPCMLQ14982 345 aa15.05■□□□□ -0
VIM-201ENST00000224237 MEX3BQ6ZN04 569 aaKnown RBP15.05■□□□□ -0
VIM-201ENST00000224237 EDARADDQ8WWZ3 215 aa15.05■□□□□ -0
VIM-201ENST00000224237 TMEM56Q96MV1 263 aa15.05■□□□□ -0
VIM-201ENST00000224237 TMEM56-RWDD3S4R434 201 aa15.05■□□□□ -0
VIM-201ENST00000224237 DSCAML1Q8TD84 2053 aa15.04■□□□□ -0
VIM-201ENST00000224237 IGHV3-43A0A0B4J1X8 118 aa15.04■□□□□ -0
VIM-201ENST00000224237 PIGBOS1A0A0B4J2F0 54 aa15.04■□□□□ -0
VIM-201ENST00000224237 ANKRD34BA5PLL1 514 aa15.04■□□□□ -0
VIM-201ENST00000224237 L7N2F9 121 aa15.04■□□□□ -0
VIM-201ENST00000224237 TNFRSF13BO14836 293 aaPredicted RBP15.04■□□□□ -0
VIM-201ENST00000224237 DANCRP0C864 163 aa15.04■□□□□ -0
VIM-201ENST00000224237 CGB3P0DN86 165 aa15.04■□□□□ -0
VIM-201ENST00000224237 CGB7P0DN87 165 aa15.04■□□□□ -0
VIM-201ENST00000224237 IGHV3-43DP0DP04 118 aa15.04■□□□□ -0
VIM-201ENST00000224237 NDUFB7P17568 137 aa15.04■□□□□ -0
VIM-201ENST00000224237 PSMB6P28072 239 aa15.04■□□□□ -0
VIM-201ENST00000224237 MSMO1Q15800 293 aa15.04■□□□□ -0
VIM-201ENST00000224237 IAH1Q2TAA2 248 aaPredicted RBP15.04■□□□□ -0
VIM-201ENST00000224237 TMEM268Q5VZI3 342 aa15.04■□□□□ -0
VIM-201ENST00000224237 TMEM65Q6PI78 240 aa15.04■□□□□ -0
VIM-201ENST00000224237 DTX2Q86UW9 622 aa15.04■□□□□ -0
VIM-201ENST00000224237 LHFPL5Q8TAF8 219 aa15.04■□□□□ -0
VIM-201ENST00000224237 THAP6Q8TBB0 222 aa15.04■□□□□ -0
VIM-201ENST00000224237 GPHA2Q96T91 129 aa15.04■□□□□ -0
VIM-201ENST00000224237 OR2D2Q9H210 308 aa15.04■□□□□ -0
VIM-201ENST00000224237 GNG12Q9UBI6 72 aa15.04■□□□□ -0
VIM-201ENST00000224237 KAAG1Q9UBP8 84 aa15.04■□□□□ -0
VIM-201ENST00000224237 TMED3Q9Y3Q3 217 aa15.04■□□□□ -0
VIM-201ENST00000224237 ADAM20O43506 726 aa15.03■□□□□ -0
VIM-201ENST00000224237 YPEL1O60688 119 aa15.03■□□□□ -0
VIM-201ENST00000224237 FSTL3O95633 263 aa15.03■□□□□ -0
VIM-201ENST00000224237 CDS2O95674 445 aa15.03■□□□□ -0
VIM-201ENST00000224237 SOD3P08294 240 aa15.03■□□□□ -0
VIM-201ENST00000224237 CXCL2P19875 107 aa15.03■□□□□ -0
VIM-201ENST00000224237 LYZL2Q7Z4W2 148 aa15.03■□□□□ -0
VIM-201ENST00000224237 ZNF695Q8IW36 515 aa15.03■□□□□ -0
VIM-201ENST00000224237 DRAM1Q8N682 238 aa15.03■□□□□ -0
VIM-201ENST00000224237 CORO2AQ92828 525 aa15.03■□□□□ -0
VIM-201ENST00000224237 YPEL2Q96QA6 119 aa15.03■□□□□ -0
VIM-201ENST00000224237 KBTBD11-OT1A0A1B0GTJ5 212 aa15.03■□□□□ -0
VIM-201ENST00000224237 DUXBA0A1W2PPF3 345 aa15.03■□□□□ -0
VIM-201ENST00000224237 hADV38S2A0JD32 116 aa15.03■□□□□ -0
VIM-201ENST00000224237 ZNF729A6NN14 1252 aaPredicted RBP15.03■□□□□ -0
VIM-201ENST00000224237 RPA2P15927 270 aa15.03■□□□□ -0
VIM-201ENST00000224237 LTC4SQ16873 150 aa15.03■□□□□ -0
VIM-201ENST00000224237 C17orf58Q2M2W7 97 aa15.03■□□□□ -0
VIM-201ENST00000224237 LRRC10Q5BKY1 277 aa15.03■□□□□ -0
VIM-201ENST00000224237 ZNF546Q86UE3 836 aa15.03■□□□□ -0
VIM-201ENST00000224237 SLC35G3Q8N808 338 aa15.03■□□□□ -0
VIM-201ENST00000224237 OR51H1Q8NH63 302 aa15.03■□□□□ -0
VIM-201ENST00000224237 IL22RA2Q969J5 263 aa15.03■□□□□ -0
VIM-201ENST00000224237 LIN7CQ9NUP9 197 aaKnown RBP15.03■□□□□ -0
VIM-201ENST00000224237 CLN8Q9UBY8 286 aa15.03■□□□□ -0
VIM-201ENST00000224237 LINC00312Q9Y6C7 94 aa15.03■□□□□ -0
VIM-201ENST00000224237 RNF212BA8MTL3 300 aa15.02■□□□□ -0
VIM-201ENST00000224237 NDUFB3O43676 98 aa15.02■□□□□ -0
VIM-201ENST00000224237 PET100P0DJ07 73 aa15.02■□□□□ -0
VIM-201ENST00000224237 LOXL3P58215 753 aa15.02■□□□□ -0
VIM-201ENST00000224237 IL15RAQ13261 267 aa15.02■□□□□ -0
VIM-201ENST00000224237 TMEM30BQ3MIR4 351 aa15.02■□□□□ -0
VIM-201ENST00000224237 MORN2Q502X0 79 aa15.02■□□□□ -0
VIM-201ENST00000224237 FAM53AQ6NSI3 398 aaPredicted RBP15.02■□□□□ -0
VIM-201ENST00000224237 TCF23Q7RTU1 214 aa15.02■□□□□ -0
VIM-201ENST00000224237 NEU4Q8WWR8 484 aaPredicted RBP15.02■□□□□ -0
VIM-201ENST00000224237 GSKIPQ9P0R6 139 aa15.02■□□□□ -0
VIM-201ENST00000224237 UBQLN2Q9UHD9 624 aa15.02■□□□□ -0
VIM-201ENST00000224237 COL8A2P25067 703 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 S100A11P31949 105 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 MEF2CQ06413 473 aaPredicted RBP15.01□□□□□ -0.01
VIM-201ENST00000224237 OR8H3Q8N146 312 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 RBPMSQ93062 196 aaKnown RBP15.01□□□□□ -0.01
VIM-201ENST00000224237 LINC00574Q9H8X3 128 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 OMGP23515 440 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 MRPS11P82912 194 aaKnown RBP15.01□□□□□ -0.01
VIM-201ENST00000224237 EXOSC2Q13868 293 aaKnown RBP15.01□□□□□ -0.01
VIM-201ENST00000224237 LYPD2Q6UXB3 125 aa15.01□□□□□ -0.01
VIM-201ENST00000224237 SELENOHQ8IZQ5 122 aaKnown RBP15.01□□□□□ -0.01
VIM-201ENST00000224237 FGFRL1Q8N441 504 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms