RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Ntsr1O88319 424 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Sox19Q62249 55 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Selenbp2Q63836 472 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Calm5Q6W3E0 140 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Olfr1028Q7TR89 324 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Q8BG31 207 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Pla2g3Q8BZT7 504 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 4930451G09RikQ8C5G4 195 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Pomt1Q8R2R1 746 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Utp23Q9CX11 249 aaKnown RBP17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Dazap2Q9DCP9 168 aa17.71■□□□□ 0.43
Trim47-201ENSMUST00000021120 Gm19410A0A140LJC7 2098 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm20911A0A087WSS0 222 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr243E9PV96 316 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Wdfy1E9Q4P1 410 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr628K7N6B2 316 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 NgfP01139 241 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Klhl8P59280 629 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 RelbQ04863 558 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr331Q5NC44 324 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Spcs3Q6ZWQ7 180 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Actbl2Q8BFZ3 376 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 CmblQ8R1G2 245 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Sco2Q8VCL2 255 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Nup37Q9CWU9 326 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 4930412O13RikQ9D5M9 106 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 S100a16Q9D708 124 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 RhcgQ9QXP0 498 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gabrg1Q9R0Y8 465 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Trbv15A0A0A6YYE3 115 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm498D3YYH9 372 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Vmn2r60L7N2A1 853 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Hprt1P00493 218 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rab2aP53994 212 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 CluQ06890 448 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Zglp1Q1WG82 266 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Epha5Q60629 876 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr1138Q8VFQ9 311 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 Pnrc2Q9CR73 140 aa17.7■□□□□ 0.42
Trim47-201ENSMUST00000021120 PtprbB2RU80 1998 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm28102A0A087WQL3 222 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 FggyA2AJL3 552 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr370E9Q848 314 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Casp16-psI6L890 176 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Tcstv3O70518 169 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Itln1O88310 313 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 ElobP62869 118 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Eif5aP63242 154 aaKnown RBP17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 St8sia5P70126 412 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 BB287469Q3UT53 144 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Fam117aQ7TNF9 451 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 SergefQ80YD6 464 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Vmn1r19Q8R2C7 308 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 B3gnt8Q8R3I9 389 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Srsf4Q8VE97 489 aaKnown RBP17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr279Q8VFD8 310 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rwdd3Q8VIL2 267 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Pip4p2Q9CZX7 257 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 GlceQ9EPS3 618 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Syt9Q9R0N9 491 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rab25Q9WTL2 213 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Zfp292Q9Z2U2 2698 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 Itpr1P11881 2749 aa17.69■□□□□ 0.42
Trim47-201ENSMUST00000021120 CrygsO35486 178 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Ppt1O88531 306 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Pax9P47242 342 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Ceacam14Q78Y72 263 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr479Q7TRV1 327 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Lrfn4Q80XU8 636 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Spem2Q8C5U4 503 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 GnalQ8CGK7 381 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 SccpdhQ8R127 429 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Pla2g16Q8R3U1 162 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Olfr60Q8VGL4 311 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Tmem178aQ9CZ16 297 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Emc9Q9DB76 206 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rarres2Q9DD06 162 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Fbn2Q61555 2907 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm35060A0A140LIV7 231 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm17655A0A1B0GT13 591 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Tmem200bD3Z0P8 284 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Lrp3E9Q1T6 790 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rab19P35294 217 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Zfp955aQ80XR7 545 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Tbl1xr1Q8BHJ5 514 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Slc25a16Q8C0K5 332 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Fam169bQ8CHT6 337 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Mrpl49Q9CQ40 166 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rep15Q9D7T1 230 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Zfand6Q9DCH6 223 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 LitafQ9JLJ0 161 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Ackr1Q9QUI6 334 aa17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 SpenQ62504 3644 aaKnown RBP17.68■□□□□ 0.42
Trim47-201ENSMUST00000021120 Samt3A2ARK7 233 aa17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Vmn1r5B2RQT2 315 aa17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm21721J3QMK7 227 aa17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Tdpoz1P0DMR5 365 aa17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Gm9125P0DMR6 365 aa17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Rps2P25444 293 aaKnown RBP17.67■□□□□ 0.42
Trim47-201ENSMUST00000021120 Dnase2P56542 353 aa17.67■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms