RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 CD8AP01732 235 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 PET100P0DJ07 73 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 PRAMEF6Q5VXH4 476 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 ADAM5Q6NVV9 412 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 UXS1Q8NBZ7 420 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 OR5T2Q8NGG2 359 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 ZNF488Q96MN9 340 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 PDCD10Q9BUL8 212 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 NMES1Q9C002 83 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 PPP1R3CQ9UQK1 317 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 OR2W1Q9Y3N9 320 aa14.37□□□□□ -0.11
PHGDH-234ENST00000642041 CRYM-AS1A6NIL9 109 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 RFPL4AA6NLU0 287 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 DBX1A6NMT0 343 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 RFPL4AL1F8VTS6 287 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 SIRPB1O00241 398 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 GPR31O00270 319 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 CXCL3P19876 107 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 HMGN3Q15651 99 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 LRP11Q86VZ4 500 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 TCTEX1D1Q8N7M0 179 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 LRTM2Q8N967 370 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 ITLN1Q8WWA0 313 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 MRGPRFQ96AM1 343 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 ZNF665Q9H7R5 613 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 GCM1Q9NP62 436 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 DYNLRB1Q9NP97 96 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 UFSP2Q9NUQ7 469 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 OR14J1Q9UGF5 321 aa14.36□□□□□ -0.11
PHGDH-234ENST00000642041 TENM1Q9UKZ4 2725 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 GOSR2O14653 212 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 SPINT2O43291 252 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 HSPA12AO43301 675 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 DUSP1P28562 367 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 HTD2P86397 168 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 CR1LQ2VPA4 569 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 TEX36Q5VZQ5 186 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 BRICD5Q6PL45 260 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 NLRC3Q7RTR2 1065 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 MOGAT3Q86VF5 341 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 LGI3Q8N145 548 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 GCSAMQ8N6F7 178 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 GRPEL2Q8TAA5 225 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 CAPSLQ8WWF8 208 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 RTN4IP1Q8WWV3 396 aaPredicted RBP14.35□□□□□ -0.11
PHGDH-234ENST00000642041 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 SDSLQ96GA7 329 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 DMRTB1Q96MA1 342 aa14.35□□□□□ -0.11
PHGDH-234ENST00000642041 IGKV1D-8A0A087WSZ0 117 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 NKX6-3A6NJ46 265 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 SHISA9B4DS77 424 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 OVOL3O00110 214 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 PSG2P11465 335 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 IL2RGP31785 369 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 LUMP51884 338 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-234ENST00000642041 PIGPP57054 158 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 SNRPD2P62316 118 aaKnown RBP14.34□□□□□ -0.11
PHGDH-234ENST00000642041 CD300CQ08708 224 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 PDCD1Q15116 288 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 NDUFA5Q16718 116 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 KRBOX4Q5JUW0 171 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 TMEM65Q6PI78 240 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 OR52B4Q8NGK2 314 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 EDARADDQ8WWZ3 215 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 IL22RA2Q969J5 263 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 TMEM204Q9BSN7 226 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 SHARPINQ9H0F6 387 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 NAA60Q9H7X0 242 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 SAP30LQ9HAJ7 183 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 FAM212BQ9NTI7 297 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-234ENST00000642041 LAMP3Q9UQV4 416 aa14.34□□□□□ -0.11
PHGDH-234ENST00000642041 K7N7A8 449 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 ATG12O94817 140 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 SLC25A4P12235 298 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 NFYAP23511 347 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-234ENST00000642041 COL10A1Q03692 680 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 LY6G6FQ5SQ64 297 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 ZNF826PQ6ZT77 177 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 H1FOOQ8IZA3 346 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-234ENST00000642041 THAP6Q8TBB0 222 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 SPIN2AQ99865 258 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 SPIN2BQ9BPZ2 258 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 SLC2A9Q9NRM0 540 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 CISD1Q9NZ45 108 aaKnown RBP14.33□□□□□ -0.12
PHGDH-234ENST00000642041 IL36RNQ9UBH0 155 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 TMED3Q9Y3Q3 217 aa14.33□□□□□ -0.12
PHGDH-234ENST00000642041 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
PHGDH-234ENST00000642041 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-234ENST00000642041 LGALS8O00214 317 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 ITGB1BP1O14713 200 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 BET1O15155 118 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 SCTP09683 121 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 AADACP22760 399 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 GABRA2P47869 451 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 PPOXP50336 477 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 MRPS11P82912 194 aaKnown RBP14.32□□□□□ -0.12
PHGDH-234ENST00000642041 MSMPQ1L6U9 139 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 RTN4RL2Q86UN3 420 aa14.32□□□□□ -0.12
PHGDH-234ENST00000642041 ASCC1Q8N9N2 400 aaKnown RBP14.32□□□□□ -0.12
PHGDH-234ENST00000642041 ADAD2Q8NCV1 583 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms