RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GLRXP35754 106 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 POLR2GP62487 172 aaKnown RBP eCLIP16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 ID3Q02535 119 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 AESQ08117 197 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 CXorf66Q5JRM2 361 aaPredicted RBP16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 OR2C3Q8N628 320 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 COQ2Q96H96 371 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 PARP12Q9H0J9 701 aaKnown RBP16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 WFDC1Q9HC57 220 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 MMP26Q9NRE1 261 aa16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 RBM7Q9Y580 266 aaKnown RBP16.57■□□□□ 0.24
PCDHB11-202ENST00000624887 SPTBN2O15020 2390 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 BORCS7-ASMTA0A0B4J1R7 106 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 OOEPA6NGQ2 149 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 A8MXE2 369 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 C12orf77C9JDV5 145 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 OR3A1P47881 315 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 NKX6-1P78426 367 aaPredicted RBP16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 NHLH2Q02577 135 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 LRRC29Q8WV35 223 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 GALMQ96C23 342 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 TP53TG5Q9Y2B4 290 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 KIAA2026Q5HYC2 2103 aa16.56■□□□□ 0.24
PCDHB11-202ENST00000624887 ABCD4O14678 606 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 OR8U9P0C7N5 309 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 SLC25A6P12236 298 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 EWSR1Q01844 656 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 COL10A1Q03692 680 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 OR8U1Q8NH10 309 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 OR1L1Q8NH94 360 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 PLA2G2EQ9NZK7 142 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 PPP1R3CQ9UQK1 317 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 CHD3Q12873 2000 aaKnown RBP16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 MMP9P14780 707 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 TDGF1P3P51864 188 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 CTAG1AP78358 180 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 IL34Q6ZMJ4 242 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 GINS3Q9BRX5 216 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 METRNQ9UJH8 293 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 KCNS2Q9ULS6 477 aa16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 ANKRD11Q6UB99 2663 aaPredicted RBP16.55■□□□□ 0.24
PCDHB11-202ENST00000624887 A0A1B0GU03 582 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 SSSCA1O60232 199 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 MED6O75586 246 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 TFF1P04155 84 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 CFHR2P36980 270 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 GABRA2P47869 451 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 KLF3P57682 345 aaPredicted RBP16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 TBR1Q16650 682 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 TOLLIPQ9H0E2 274 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 MAGT1Q9H0U3 335 aa16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 LYRM2Q9NU23 88 aaPredicted RBP16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 LIN7CQ9NUP9 197 aaKnown RBP16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 KLF2Q9Y5W3 355 aaPredicted RBP16.54■□□□□ 0.24
PCDHB11-202ENST00000624887 A0A0G2JRQ6 117 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 FAM24AA6NFZ4 105 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 SRRM5B3KS81 715 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PITX3O75364 302 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 SEC11BP0C7V7 166 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 BMP5P22003 454 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 IL2RGP31785 369 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 LPAR6P43657 344 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 BLOC1S1P78537 153 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PAX5Q02548 391 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 FAM27E3Q08E93 113 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 DRAM1Q8N682 238 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 TMEM171Q8WVE6 324 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 GPR146Q96CH1 333 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 MS4A7Q9GZW8 240 aaPredicted RBP16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PLEKHF2Q9H8W4 249 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 IGLV3-9A0A075B6K5 115 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 DNASE2O00115 360 aaPredicted RBP16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PRRG2O14669 202 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 IGKV1-39P01597 117 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 HBZP02008 142 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 APOC3P02656 99 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 IGKV1D-39P04432 117 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 CAV2P51636 162 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 VAMP2P63027 116 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PJVKQ0ZLH3 352 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 KRBOX4Q5JUW0 171 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 FAM90A1Q86YD7 464 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 DOLPP1Q86YN1 238 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 CD177Q8N6Q3 437 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 Q8NA96 180 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 LSM10Q969L4 123 aaKnown RBP16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 NARS2Q96I59 477 aaKnown RBP16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 SLC25A31Q9H0C2 315 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 PARP11Q9NR21 331 aa16.53■□□□□ 0.24
PCDHB11-202ENST00000624887 IGSF23A1L1A6 192 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 SPP1P10451 314 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 EGR1P18146 543 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 PRDX2P32119 198 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 CLRN3Q8NCR9 226 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 LURAP1Q96LR2 239 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 HRH4Q9H3N8 390 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 SEBOXQ9HB31 216 aaPredicted RBP16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 FAM212BQ9NTI7 297 aaPredicted RBP16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 RNF115Q9Y4L5 304 aa16.52■□□□□ 0.24
PCDHB11-202ENST00000624887 APC2O95996 2303 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms